Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK7P50613 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK7P50613 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.71■■□□□ 1.07
CDK7P50613 AC092338.2-201ENST00000568827 1415 ntBASIC21.71■■□□□ 1.07
CDK7P50613 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CDK7P50613 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDK7P50613 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDK7P50613 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CDK7P50613 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.7■■□□□ 1.07
CDK7P50613 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.7■■□□□ 1.06
CDK7P50613 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 DPP3P2-201ENST00000416030 1696 ntBASIC21.7■■□□□ 1.06
CDK7P50613 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.7■■□□□ 1.06
CDK7P50613 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.7■■□□□ 1.06
CDK7P50613 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 FAM207BP-201ENST00000447172 505 ntBASIC21.7■■□□□ 1.06
CDK7P50613 FAM86EP-206ENST00000510506 987 ntBASIC21.7■■□□□ 1.06
CDK7P50613 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.7■■□□□ 1.06
CDK7P50613 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDK7P50613 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.7■■□□□ 1.06
CDK7P50613 AC011558.1-201ENST00000623459 338 ntBASIC21.7■■□□□ 1.06
CDK7P50613 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.7■■□□□ 1.06
CDK7P50613 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.7■■□□□ 1.06
CDK7P50613 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.7■■□□□ 1.06
CDK7P50613 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDK7P50613 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDK7P50613 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.7■■□□□ 1.06
CDK7P50613 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDK7P50613 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.69■■□□□ 1.06
CDK7P50613 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.69■■□□□ 1.06
CDK7P50613 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.69■■□□□ 1.06
CDK7P50613 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.69■■□□□ 1.06
CDK7P50613 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.69■■□□□ 1.06
CDK7P50613 AC141257.4-201ENST00000634557 245 ntBASIC21.69■■□□□ 1.06
CDK7P50613 AC136944.6-201ENST00000634818 245 ntBASIC21.69■■□□□ 1.06
CDK7P50613 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.69■■□□□ 1.06
CDK7P50613 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDK7P50613 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 AL137060.1-201ENST00000618151 2648 ntBASIC21.69■■□□□ 1.06
CDK7P50613 PKD1P6-201ENST00000343738 4769 ntBASIC21.69■■□□□ 1.06
CDK7P50613 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDK7P50613 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDK7P50613 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.68■■□□□ 1.06
CDK7P50613 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
CDK7P50613 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CDK7P50613 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.68■■□□□ 1.06
CDK7P50613 AL121894.2-201ENST00000602977 491 ntBASIC21.68■■□□□ 1.06
CDK7P50613 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.68■■□□□ 1.06
CDK7P50613 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDK7P50613 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.68■■□□□ 1.06
CDK7P50613 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CDK7P50613 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
CDK7P50613 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDK7P50613 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.68■■□□□ 1.06
CDK7P50613 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.67■■□□□ 1.06
CDK7P50613 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.67■■□□□ 1.06
CDK7P50613 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDK7P50613 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CDK7P50613 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.67■■□□□ 1.06
CDK7P50613 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.67■■□□□ 1.06
CDK7P50613 AL121956.5-201ENST00000625261 221 ntBASIC21.67■■□□□ 1.06
CDK7P50613 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK7P50613 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.66■■□□□ 1.06
CDK7P50613 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CDK7P50613 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDK7P50613 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.66■■□□□ 1.06
CDK7P50613 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.66■■□□□ 1.06
CDK7P50613 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.66■■□□□ 1.06
CDK7P50613 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CDK7P50613 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.66■■□□□ 1.06
CDK7P50613 PCED1CP-201ENST00000419887 785 ntBASIC21.66■■□□□ 1.06
CDK7P50613 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.66■■□□□ 1.06
CDK7P50613 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms