Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 AC007613.1-201ENST00000572811 2597 ntBASIC13.52□□□□□ -0.25
RPL13AP40429 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL13AP40429 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.51□□□□□ -0.25
RPL13AP40429 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 AL031602.1-201ENST00000633169 911 ntBASIC13.51□□□□□ -0.25
RPL13AP40429 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RPL13AP40429 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RPL13AP40429 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL13AP40429 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL13AP40429 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL13AP40429 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
RPL13AP40429 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RPL13AP40429 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL13AP40429 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.49□□□□□ -0.25
RPL13AP40429 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
RPL13AP40429 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.49□□□□□ -0.25
RPL13AP40429 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 AL034346.1-201ENST00000568244 1277 ntBASIC13.49□□□□□ -0.25
RPL13AP40429 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 AL512631.2-201ENST00000604634 923 ntBASIC13.49□□□□□ -0.25
RPL13AP40429 AL139246.5-201ENST00000606645 996 ntBASIC13.49□□□□□ -0.25
RPL13AP40429 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
RPL13AP40429 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.49□□□□□ -0.25
RPL13AP40429 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.49□□□□□ -0.25
RPL13AP40429 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms