Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.67■□□□□ 0.9
GRIK1P39086 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.67■□□□□ 0.9
GRIK1P39086 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.67■□□□□ 0.9
GRIK1P39086 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.67■□□□□ 0.9
GRIK1P39086 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.67■□□□□ 0.9
GRIK1P39086 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.67■□□□□ 0.9
GRIK1P39086 AP003071.4-201ENST00000562276 1284 ntBASIC20.67■□□□□ 0.9
GRIK1P39086 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
GRIK1P39086 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIK1P39086 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.67■□□□□ 0.9
GRIK1P39086 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIK1P39086 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 KRT16P1-201ENST00000399124 1418 ntBASIC20.66■□□□□ 0.9
GRIK1P39086 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIK1P39086 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GRIK1P39086 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GRIK1P39086 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GRIK1P39086 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GRIK1P39086 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.65■□□□□ 0.9
GRIK1P39086 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.65■□□□□ 0.9
GRIK1P39086 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 AL355075.4-201ENST00000554988 638 ntBASIC20.65■□□□□ 0.9
GRIK1P39086 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.65■□□□□ 0.9
GRIK1P39086 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.65■□□□□ 0.9
GRIK1P39086 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.65■□□□□ 0.9
GRIK1P39086 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.65■□□□□ 0.9
GRIK1P39086 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GRIK1P39086 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GRIK1P39086 AC009237.14-201ENST00000609975 1594 ntBASIC20.64■□□□□ 0.9
GRIK1P39086 AC112907.3-201ENST00000577781 2400 ntBASIC20.64■□□□□ 0.89
GRIK1P39086 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GRIK1P39086 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.64■□□□□ 0.89
GRIK1P39086 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.64■□□□□ 0.89
GRIK1P39086 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.64■□□□□ 0.89
GRIK1P39086 TSPY15P-201ENST00000457163 923 ntBASIC20.64■□□□□ 0.89
GRIK1P39086 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.64■□□□□ 0.89
GRIK1P39086 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.64■□□□□ 0.89
GRIK1P39086 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GRIK1P39086 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.64■□□□□ 0.89
GRIK1P39086 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GRIK1P39086 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.63■□□□□ 0.89
GRIK1P39086 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
GRIK1P39086 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.63■□□□□ 0.89
GRIK1P39086 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 NUDT16P1-203ENST00000513809 620 ntBASIC20.63■□□□□ 0.89
GRIK1P39086 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.63■□□□□ 0.89
GRIK1P39086 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.63■□□□□ 0.89
GRIK1P39086 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.63■□□□□ 0.89
GRIK1P39086 AC073912.3-201ENST00000624414 853 ntBASIC20.63■□□□□ 0.89
GRIK1P39086 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GRIK1P39086 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.63■□□□□ 0.89
GRIK1P39086 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GRIK1P39086 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
GRIK1P39086 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms