Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CTNNA1P35221 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.66■□□□□ 0.9
CTNNA1P35221 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.66■□□□□ 0.9
CTNNA1P35221 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.66■□□□□ 0.9
CTNNA1P35221 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNNA1P35221 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNNA1P35221 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CTNNA1P35221 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
CTNNA1P35221 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CTNNA1P35221 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNA1P35221 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CTNNA1P35221 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTNNA1P35221 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNNA1P35221 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNNA1P35221 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 AL032819.2-201ENST00000624543 2162 ntBASIC20.65■□□□□ 0.9
CTNNA1P35221 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.65■□□□□ 0.9
CTNNA1P35221 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNNA1P35221 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNA1P35221 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.65■□□□□ 0.9
CTNNA1P35221 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNNA1P35221 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNA1P35221 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNA1P35221 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNA1P35221 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNA1P35221 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNNA1P35221 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
CTNNA1P35221 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.64■□□□□ 0.89
CTNNA1P35221 AC005181.1-201ENST00000604782 1256 ntBASIC20.64■□□□□ 0.89
CTNNA1P35221 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CTNNA1P35221 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTNNA1P35221 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.64■□□□□ 0.89
CTNNA1P35221 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTNNA1P35221 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CTNNA1P35221 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 AC093503.3-201ENST00000624917 2352 ntBASIC20.64■□□□□ 0.89
CTNNA1P35221 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CTNNA1P35221 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNNA1P35221 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CTNNA1P35221 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTNNA1P35221 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.63■□□□□ 0.89
CTNNA1P35221 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTNNA1P35221 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTNNA1P35221 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CTNNA1P35221 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNNA1P35221 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNNA1P35221 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNNA1P35221 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CTNNA1P35221 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 AC004911.1-201ENST00000416316 871 ntBASIC20.62■□□□□ 0.89
CTNNA1P35221 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNNA1P35221 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.62■□□□□ 0.89
CTNNA1P35221 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTNNA1P35221 MIR5787-201ENST00000611784 55 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms