Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH3P22223 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH3P22223 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH3P22223 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH3P22223 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH3P22223 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH3P22223 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH3P22223 AC110285.5-201ENST00000611501 352 ntBASIC19.15■□□□□ 0.66
CDH3P22223 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH3P22223 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH3P22223 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH3P22223 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH3P22223 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CDH3P22223 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.14■□□□□ 0.66
CDH3P22223 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH3P22223 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH3P22223 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 AC133681.1-201ENST00000465482 601 ntBASIC19.14■□□□□ 0.65
CDH3P22223 RPS2P4-201ENST00000476944 856 ntBASIC19.14■□□□□ 0.65
CDH3P22223 AC008550.1-201ENST00000511500 884 ntBASIC19.14■□□□□ 0.65
CDH3P22223 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH3P22223 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH3P22223 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH3P22223 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH3P22223 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH3P22223 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH3P22223 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH3P22223 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH3P22223 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH3P22223 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH3P22223 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.13■□□□□ 0.65
CDH3P22223 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH3P22223 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH3P22223 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH3P22223 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.13■□□□□ 0.65
CDH3P22223 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH3P22223 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDH3P22223 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH3P22223 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH3P22223 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH3P22223 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH3P22223 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDH3P22223 MIR718-201ENST00000390190 70 ntBASIC19.12■□□□□ 0.65
CDH3P22223 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH3P22223 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH3P22223 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.12■□□□□ 0.65
CDH3P22223 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH3P22223 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CDH3P22223 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH3P22223 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDH3P22223 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH3P22223 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms