Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 DUX4L16-201ENST00000555130 1264 ntBASIC17.18■□□□□ 0.34
ATF1P18846 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.18■□□□□ 0.34
ATF1P18846 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 KRT8P17-201ENST00000453110 1448 ntBASIC17.18■□□□□ 0.34
ATF1P18846 AC068338.2-201ENST00000563278 1430 ntBASIC17.18■□□□□ 0.34
ATF1P18846 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATF1P18846 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATF1P18846 PTBP1P-201ENST00000554374 1601 ntBASIC17.18■□□□□ 0.34
ATF1P18846 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATF1P18846 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 CNN2P6-201ENST00000439038 900 ntBASIC17.17■□□□□ 0.34
ATF1P18846 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.17■□□□□ 0.34
ATF1P18846 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.17■□□□□ 0.34
ATF1P18846 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATF1P18846 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.17■□□□□ 0.34
ATF1P18846 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATF1P18846 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATF1P18846 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.16■□□□□ 0.34
ATF1P18846 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.16■□□□□ 0.34
ATF1P18846 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 KRT18P68-201ENST00000392293 1000 ntBASIC17.16■□□□□ 0.34
ATF1P18846 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.16■□□□□ 0.34
ATF1P18846 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.16■□□□□ 0.34
ATF1P18846 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.16■□□□□ 0.34
ATF1P18846 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.16■□□□□ 0.34
ATF1P18846 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.16■□□□□ 0.34
ATF1P18846 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATF1P18846 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.16■□□□□ 0.34
ATF1P18846 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATF1P18846 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATF1P18846 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ATF1P18846 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF1P18846 KRT16P6-202ENST00000425692 1426 ntBASIC17.15■□□□□ 0.34
ATF1P18846 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ATF1P18846 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.15■□□□□ 0.34
ATF1P18846 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.15■□□□□ 0.34
ATF1P18846 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.15■□□□□ 0.34
ATF1P18846 AL031963.3-201ENST00000606441 850 ntBASIC17.15■□□□□ 0.34
ATF1P18846 AC105020.6-201ENST00000621523 1217 ntBASIC17.15■□□□□ 0.34
ATF1P18846 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF1P18846 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ATF1P18846 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms