Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDGFRAP16234 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.57■□□□□ 0.88
PDGFRAP16234 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.56■□□□□ 0.88
PDGFRAP16234 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.56■□□□□ 0.88
PDGFRAP16234 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 AC098590.1-201ENST00000468126 897 ntBASIC20.56■□□□□ 0.88
PDGFRAP16234 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.56■□□□□ 0.88
PDGFRAP16234 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PDGFRAP16234 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.56■□□□□ 0.88
PDGFRAP16234 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
PDGFRAP16234 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDGFRAP16234 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDGFRAP16234 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 AP006587.1-201ENST00000534129 1502 ntBASIC20.55■□□□□ 0.88
PDGFRAP16234 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PDGFRAP16234 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.55■□□□□ 0.88
PDGFRAP16234 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.55■□□□□ 0.88
PDGFRAP16234 AC069544.1-201ENST00000609399 999 ntBASIC20.55■□□□□ 0.88
PDGFRAP16234 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.55■□□□□ 0.88
PDGFRAP16234 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.55■□□□□ 0.88
PDGFRAP16234 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDGFRAP16234 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PDGFRAP16234 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDGFRAP16234 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.54■□□□□ 0.88
PDGFRAP16234 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PDGFRAP16234 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDGFRAP16234 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.54■□□□□ 0.88
PDGFRAP16234 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.54■□□□□ 0.88
PDGFRAP16234 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDGFRAP16234 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.54■□□□□ 0.88
PDGFRAP16234 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDGFRAP16234 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.53■□□□□ 0.88
PDGFRAP16234 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDGFRAP16234 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.53■□□□□ 0.88
PDGFRAP16234 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.53■□□□□ 0.88
PDGFRAP16234 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.53■□□□□ 0.88
PDGFRAP16234 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.53■□□□□ 0.88
PDGFRAP16234 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDGFRAP16234 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.53■□□□□ 0.88
PDGFRAP16234 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDGFRAP16234 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PDGFRAP16234 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDGFRAP16234 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.53■□□□□ 0.88
PDGFRAP16234 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDGFRAP16234 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PDGFRAP16234 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDGFRAP16234 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDGFRAP16234 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDGFRAP16234 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.52■□□□□ 0.88
PDGFRAP16234 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PDGFRAP16234 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDGFRAP16234 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDGFRAP16234 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms