Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDH1P12830 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH1P12830 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH1P12830 TMEM179-206ENST00000616017 1645 ntBASIC19.08■□□□□ 0.65
CDH1P12830 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH1P12830 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH1P12830 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH1P12830 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH1P12830 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH1P12830 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH1P12830 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CDH1P12830 CD99P1-205ENST00000527459 561 ntBASIC19.08■□□□□ 0.64
CDH1P12830 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.08■□□□□ 0.64
CDH1P12830 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH1P12830 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH1P12830 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH1P12830 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH1P12830 AP003097.1-201ENST00000530657 1135 ntBASIC19.07■□□□□ 0.64
CDH1P12830 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.07■□□□□ 0.64
CDH1P12830 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH1P12830 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH1P12830 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.07■□□□□ 0.64
CDH1P12830 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH1P12830 AC018553.1-201ENST00000616682 1458 ntBASIC19.07■□□□□ 0.64
CDH1P12830 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH1P12830 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CDH1P12830 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH1P12830 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH1P12830 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH1P12830 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 AP001271.2-201ENST00000624018 1556 ntBASIC19.06■□□□□ 0.64
CDH1P12830 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDH1P12830 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDH1P12830 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH1P12830 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH1P12830 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 AC008403.3-201ENST00000598924 454 ntBASIC19.06■□□□□ 0.64
CDH1P12830 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH1P12830 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH1P12830 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH1P12830 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.06■□□□□ 0.64
CDH1P12830 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH1P12830 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDH1P12830 AC116351.2-201ENST00000606540 1585 ntBASIC19.06■□□□□ 0.64
CDH1P12830 AC009237.14-201ENST00000609975 1594 ntBASIC19.06■□□□□ 0.64
CDH1P12830 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH1P12830 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH1P12830 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CDH1P12830 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH1P12830 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH1P12830 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH1P12830 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH1P12830 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CDH1P12830 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH1P12830 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH1P12830 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CDH1P12830 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH1P12830 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH1P12830 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CDH1P12830 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH1P12830 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH1P12830 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH1P12830 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH1P12830 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CDH1P12830 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH1P12830 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.04■□□□□ 0.64
CDH1P12830 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.04■□□□□ 0.64
CDH1P12830 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH1P12830 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms