Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SRFP11831 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFP11831 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SRFP11831 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SRFP11831 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFP11831 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRFP11831 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.91■□□□□ 0.78
SRFP11831 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.91■□□□□ 0.78
SRFP11831 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.91■□□□□ 0.78
SRFP11831 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFP11831 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.91■□□□□ 0.78
SRFP11831 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRFP11831 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.9■□□□□ 0.78
SRFP11831 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.9■□□□□ 0.78
SRFP11831 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
SRFP11831 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.9■□□□□ 0.78
SRFP11831 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.9■□□□□ 0.78
SRFP11831 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.9■□□□□ 0.78
SRFP11831 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.9■□□□□ 0.78
SRFP11831 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.9■□□□□ 0.78
SRFP11831 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.9■□□□□ 0.78
SRFP11831 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.9■□□□□ 0.78
SRFP11831 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SRFP11831 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SRFP11831 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.9■□□□□ 0.78
SRFP11831 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRFP11831 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 KRT8P45-201ENST00000414328 1447 ntBASIC19.89■□□□□ 0.77
SRFP11831 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.89■□□□□ 0.77
SRFP11831 AC112907.2-201ENST00000448639 330 ntBASIC19.89■□□□□ 0.77
SRFP11831 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.89■□□□□ 0.77
SRFP11831 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.89■□□□□ 0.77
SRFP11831 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SRFP11831 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.89■□□□□ 0.77
SRFP11831 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 ZNF444P1-201ENST00000559497 298 ntBASIC19.89■□□□□ 0.77
SRFP11831 CKBP1-201ENST00000565489 1086 ntBASIC19.89■□□□□ 0.77
SRFP11831 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.89■□□□□ 0.77
SRFP11831 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
SRFP11831 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRFP11831 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.88■□□□□ 0.77
SRFP11831 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.88■□□□□ 0.77
SRFP11831 AC092720.2-201ENST00000602388 1665 ntBASIC19.88■□□□□ 0.77
SRFP11831 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.88■□□□□ 0.77
SRFP11831 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SRFP11831 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.88■□□□□ 0.77
SRFP11831 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.88■□□□□ 0.77
SRFP11831 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.88■□□□□ 0.77
SRFP11831 AC083849.1-201ENST00000615227 514 ntBASIC19.88■□□□□ 0.77
SRFP11831 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.88■□□□□ 0.77
SRFP11831 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SRFP11831 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
SRFP11831 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
SRFP11831 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRFP11831 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SRFP11831 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 FEM1AP4-201ENST00000443167 1987 ntBASIC19.87■□□□□ 0.77
SRFP11831 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRFP11831 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRFP11831 ATP5G2P1-201ENST00000433580 426 ntBASIC19.87■□□□□ 0.77
SRFP11831 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.87■□□□□ 0.77
SRFP11831 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.87■□□□□ 0.77
SRFP11831 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.87■□□□□ 0.77
SRFP11831 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.87■□□□□ 0.77
SRFP11831 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.87■□□□□ 0.77
SRFP11831 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.87■□□□□ 0.77
SRFP11831 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.87■□□□□ 0.77
SRFP11831 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRFP11831 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SRFP11831 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms