Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBCP0CG48 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 AC010980.2-201ENST00000587099 1412 ntBASIC17.16■□□□□ 0.34
UBCP0CG48 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
UBCP0CG48 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 AL032819.2-201ENST00000624543 2162 ntBASIC17.16■□□□□ 0.34
UBCP0CG48 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
UBCP0CG48 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBCP0CG48 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
UBCP0CG48 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.15■□□□□ 0.34
UBCP0CG48 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
UBCP0CG48 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.15■□□□□ 0.34
UBCP0CG48 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.15■□□□□ 0.34
UBCP0CG48 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
UBCP0CG48 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.15■□□□□ 0.34
UBCP0CG48 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBCP0CG48 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
UBCP0CG48 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
UBCP0CG48 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBCP0CG48 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBCP0CG48 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBCP0CG48 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UBCP0CG48 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.14■□□□□ 0.33
UBCP0CG48 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.14■□□□□ 0.33
UBCP0CG48 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.14■□□□□ 0.33
UBCP0CG48 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
UBCP0CG48 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBCP0CG48 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBCP0CG48 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.14■□□□□ 0.33
UBCP0CG48 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBCP0CG48 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBCP0CG48 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBCP0CG48 AC120498.9-201ENST00000339021 3867 ntBASIC17.13■□□□□ 0.33
UBCP0CG48 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms