Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.19■■□□□ 1.14
HOXC6P09630 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HOXC6P09630 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.19■■□□□ 1.14
HOXC6P09630 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.19■■□□□ 1.14
HOXC6P09630 AC141257.4-201ENST00000634557 245 ntBASIC22.19■■□□□ 1.14
HOXC6P09630 AC136944.6-201ENST00000634818 245 ntBASIC22.19■■□□□ 1.14
HOXC6P09630 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 TMEM179-206ENST00000616017 1645 ntBASIC22.19■■□□□ 1.14
HOXC6P09630 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HOXC6P09630 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.19■■□□□ 1.14
HOXC6P09630 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HOXC6P09630 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
HOXC6P09630 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.19■■□□□ 1.14
HOXC6P09630 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
HOXC6P09630 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.18■■□□□ 1.14
HOXC6P09630 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.18■■□□□ 1.14
HOXC6P09630 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
HOXC6P09630 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HOXC6P09630 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HOXC6P09630 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HOXC6P09630 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HOXC6P09630 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HOXC6P09630 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
HOXC6P09630 AP000550.4-202ENST00000639755 178 ntBASIC22.18■■□□□ 1.14
HOXC6P09630 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HOXC6P09630 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.18■■□□□ 1.14
HOXC6P09630 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
HOXC6P09630 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HOXC6P09630 AC092720.2-201ENST00000602388 1665 ntBASIC22.17■■□□□ 1.14
HOXC6P09630 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
HOXC6P09630 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
HOXC6P09630 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.17■■□□□ 1.14
HOXC6P09630 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.17■■□□□ 1.14
HOXC6P09630 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.17■■□□□ 1.14
HOXC6P09630 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.17■■□□□ 1.14
HOXC6P09630 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.17■■□□□ 1.14
HOXC6P09630 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.17■■□□□ 1.14
HOXC6P09630 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.17■■□□□ 1.14
HOXC6P09630 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HOXC6P09630 CLDN5-201ENST00000403084 2357 ntBASIC22.17■■□□□ 1.14
HOXC6P09630 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
HOXC6P09630 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HOXC6P09630 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.17■■□□□ 1.14
HOXC6P09630 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HOXC6P09630 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
HOXC6P09630 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HOXC6P09630 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HOXC6P09630 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.16■■□□□ 1.14
HOXC6P09630 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
HOXC6P09630 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HOXC6P09630 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.16■■□□□ 1.14
HOXC6P09630 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.16■■□□□ 1.14
HOXC6P09630 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.16■■□□□ 1.14
HOXC6P09630 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HOXC6P09630 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.16■■□□□ 1.14
HOXC6P09630 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HOXC6P09630 AL353719.1-201ENST00000566847 864 ntBASIC22.16■■□□□ 1.14
HOXC6P09630 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.16■■□□□ 1.14
HOXC6P09630 AC011558.1-201ENST00000623459 338 ntBASIC22.16■■□□□ 1.14
HOXC6P09630 AL121956.5-201ENST00000625261 221 ntBASIC22.16■■□□□ 1.14
HOXC6P09630 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HOXC6P09630 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.16■■□□□ 1.14
HOXC6P09630 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HOXC6P09630 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
HOXC6P09630 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.15■■□□□ 1.14
HOXC6P09630 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HOXC6P09630 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 AC009947.2-201ENST00000444014 672 ntBASIC22.15■■□□□ 1.14
HOXC6P09630 AL512604.3-201ENST00000569583 964 ntBASIC22.15■■□□□ 1.14
HOXC6P09630 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HOXC6P09630 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.15■■□□□ 1.14
HOXC6P09630 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.15■■□□□ 1.14
HOXC6P09630 AL031432.5-201ENST00000641059 760 ntBASIC22.15■■□□□ 1.14
HOXC6P09630 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.15■■□□□ 1.14
HOXC6P09630 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.15■■□□□ 1.14
HOXC6P09630 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HOXC6P09630 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HOXC6P09630 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HOXC6P09630 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
HOXC6P09630 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 AC092647.4-201ENST00000457211 535 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms