Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 BICD1-207ENST00000551848 1962 ntBASIC16.47■□□□□ 0.23
CD74P04233 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.47■□□□□ 0.23
CD74P04233 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD74P04233 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD74P04233 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.47■□□□□ 0.23
CD74P04233 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 AC020916.1-201ENST00000587762 1774 ntBASIC16.46■□□□□ 0.23
CD74P04233 Z98044.1-201ENST00000632503 1764 ntBASIC16.46■□□□□ 0.23
CD74P04233 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CD74P04233 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD74P04233 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.46■□□□□ 0.23
CD74P04233 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.46■□□□□ 0.23
CD74P04233 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CD74P04233 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.46■□□□□ 0.23
CD74P04233 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.46■□□□□ 0.23
CD74P04233 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.46■□□□□ 0.23
CD74P04233 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.46■□□□□ 0.23
CD74P04233 AL136967.2-201ENST00000623968 743 ntBASIC16.46■□□□□ 0.23
CD74P04233 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.46■□□□□ 0.23
CD74P04233 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.46■□□□□ 0.23
CD74P04233 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.46■□□□□ 0.23
CD74P04233 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CD74P04233 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD74P04233 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD74P04233 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CD74P04233 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.46■□□□□ 0.22
CD74P04233 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD74P04233 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CD74P04233 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
CD74P04233 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CD74P04233 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.45■□□□□ 0.22
CD74P04233 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.45■□□□□ 0.22
CD74P04233 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.45■□□□□ 0.22
CD74P04233 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD74P04233 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.45■□□□□ 0.22
CD74P04233 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD74P04233 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.45■□□□□ 0.22
CD74P04233 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 AL354751.1-201ENST00000412768 1863 ntBASIC16.45■□□□□ 0.22
CD74P04233 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 AC138932.1-201ENST00000534164 6830 ntBASIC16.45■□□□□ 0.22
CD74P04233 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CD74P04233 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD74P04233 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
CD74P04233 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD74P04233 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CD74P04233 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CD74P04233 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.44■□□□□ 0.22
CD74P04233 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.44■□□□□ 0.22
CD74P04233 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.44■□□□□ 0.22
CD74P04233 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.44■□□□□ 0.22
CD74P04233 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD74P04233 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms