Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDGFBP01127 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFBP01127 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFBP01127 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFBP01127 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFBP01127 CA15P1-201ENST00000481698 905 ntBASIC19.76■□□□□ 0.75
PDGFBP01127 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDGFBP01127 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.76■□□□□ 0.75
PDGFBP01127 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFBP01127 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 AC121338.2-201ENST00000622535 1744 ntBASIC19.76■□□□□ 0.75
PDGFBP01127 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFBP01127 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFBP01127 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PDGFBP01127 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFBP01127 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PDGFBP01127 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.75■□□□□ 0.75
PDGFBP01127 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 EMBP1-201ENST00000458200 901 ntBASIC19.75■□□□□ 0.75
PDGFBP01127 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.75■□□□□ 0.75
PDGFBP01127 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.75■□□□□ 0.75
PDGFBP01127 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.75■□□□□ 0.75
PDGFBP01127 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 AL031008.1-201ENST00000619963 541 ntBASIC19.75■□□□□ 0.75
PDGFBP01127 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFBP01127 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PDGFBP01127 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDGFBP01127 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFBP01127 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFBP01127 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFBP01127 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFBP01127 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.74■□□□□ 0.75
PDGFBP01127 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.74■□□□□ 0.75
PDGFBP01127 MIR3180-1-201ENST00000580374 94 ntBASIC19.74■□□□□ 0.75
PDGFBP01127 MIR3180-3-201ENST00000584616 94 ntBASIC19.74■□□□□ 0.75
PDGFBP01127 IFNL4P1-201ENST00000607083 540 ntBASIC19.74■□□□□ 0.75
PDGFBP01127 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PDGFBP01127 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.74■□□□□ 0.75
PDGFBP01127 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.74■□□□□ 0.75
PDGFBP01127 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFBP01127 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
PDGFBP01127 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PDGFBP01127 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.73■□□□□ 0.75
PDGFBP01127 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDGFBP01127 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.73■□□□□ 0.75
PDGFBP01127 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.73■□□□□ 0.75
PDGFBP01127 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.73■□□□□ 0.75
PDGFBP01127 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.73■□□□□ 0.75
PDGFBP01127 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PDGFBP01127 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFBP01127 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDGFBP01127 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDGFBP01127 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFBP01127 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFBP01127 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 AP000523.1-201ENST00000398242 1049 ntBASIC19.72■□□□□ 0.75
PDGFBP01127 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.72■□□□□ 0.75
PDGFBP01127 AL645929.1-201ENST00000420084 975 ntBASIC19.72■□□□□ 0.75
PDGFBP01127 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFBP01127 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFBP01127 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFBP01127 AC005229.4-201ENST00000610085 2198 ntBASIC19.72■□□□□ 0.75
PDGFBP01127 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms