Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM4BO94953 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDM4BO94953 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM4BO94953 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM4BO94953 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDM4BO94953 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.17■□□□□ 0.34
KDM4BO94953 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.16■□□□□ 0.34
KDM4BO94953 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
KDM4BO94953 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 LTB4R2-202ENST00000528054 3092 ntBASIC17.16■□□□□ 0.34
KDM4BO94953 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 AC005082.1-201ENST00000413042 2259 ntBASIC17.16■□□□□ 0.34
KDM4BO94953 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.16■□□□□ 0.34
KDM4BO94953 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.16■□□□□ 0.34
KDM4BO94953 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KDM4BO94953 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
KDM4BO94953 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.16■□□□□ 0.34
KDM4BO94953 AC013268.1-206ENST00000638368 961 ntBASIC17.16■□□□□ 0.34
KDM4BO94953 AC112229.1-201ENST00000639295 961 ntBASIC17.16■□□□□ 0.34
KDM4BO94953 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.16■□□□□ 0.34
KDM4BO94953 AC093503.3-201ENST00000624917 2352 ntBASIC17.16■□□□□ 0.34
KDM4BO94953 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KDM4BO94953 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KDM4BO94953 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KDM4BO94953 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.15■□□□□ 0.34
KDM4BO94953 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KDM4BO94953 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.15■□□□□ 0.34
KDM4BO94953 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 AC137761.2-201ENST00000561729 223 ntBASIC17.15■□□□□ 0.34
KDM4BO94953 AC145350.3-201ENST00000569033 163 ntBASIC17.15■□□□□ 0.34
KDM4BO94953 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.15■□□□□ 0.34
KDM4BO94953 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
KDM4BO94953 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.15■□□□□ 0.34
KDM4BO94953 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KDM4BO94953 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.15■□□□□ 0.34
KDM4BO94953 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
KDM4BO94953 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
KDM4BO94953 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM4BO94953 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM4BO94953 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.14■□□□□ 0.33
KDM4BO94953 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM4BO94953 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 CYP21A1P-202ENST00000354927 1481 ntBASIC17.14■□□□□ 0.33
KDM4BO94953 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 KRT18P5-201ENST00000436075 1291 ntBASIC17.14■□□□□ 0.33
KDM4BO94953 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.14■□□□□ 0.33
KDM4BO94953 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.14■□□□□ 0.33
KDM4BO94953 AL356652.1-201ENST00000615962 565 ntBASIC17.14■□□□□ 0.33
KDM4BO94953 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM4BO94953 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
KDM4BO94953 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KDM4BO94953 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KDM4BO94953 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM4BO94953 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.14■□□□□ 0.33
KDM4BO94953 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms