Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNT1O60563 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
CCNT1O60563 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNT1O60563 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.27■■□□□ 1.16
CCNT1O60563 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNT1O60563 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNT1O60563 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNT1O60563 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CCNT1O60563 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNT1O60563 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNT1O60563 TMEM191A-211ENST00000637163 1067 ntBASIC22.27■■□□□ 1.16
CCNT1O60563 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNT1O60563 TREX1-205ENST00000625293 1783 ntBASIC22.27■■□□□ 1.16
CCNT1O60563 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CCNT1O60563 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
CCNT1O60563 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNT1O60563 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCNT1O60563 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNT1O60563 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CCNT1O60563 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNT1O60563 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNT1O60563 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNT1O60563 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNT1O60563 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNT1O60563 AC133681.1-201ENST00000465482 601 ntBASIC22.26■■□□□ 1.15
CCNT1O60563 AL359736.2-201ENST00000621992 437 ntBASIC22.26■■□□□ 1.15
CCNT1O60563 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CCNT1O60563 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNT1O60563 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCNT1O60563 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNT1O60563 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.25■■□□□ 1.15
CCNT1O60563 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNT1O60563 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CCNT1O60563 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.25■■□□□ 1.15
CCNT1O60563 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.25■■□□□ 1.15
CCNT1O60563 AC110285.5-201ENST00000611501 352 ntBASIC22.25■■□□□ 1.15
CCNT1O60563 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.25■■□□□ 1.15
CCNT1O60563 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNT1O60563 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNT1O60563 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 KRT18P16-201ENST00000510337 1294 ntBASIC22.24■■□□□ 1.15
CCNT1O60563 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 AC142381.4-202ENST00000563973 229 ntBASIC22.24■■□□□ 1.15
CCNT1O60563 AC004264.1-201ENST00000608354 794 ntBASIC22.24■■□□□ 1.15
CCNT1O60563 FAM197Y4-202ENST00000622692 608 ntBASIC22.24■■□□□ 1.15
CCNT1O60563 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNT1O60563 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CCNT1O60563 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CCNT1O60563 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CCNT1O60563 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNT1O60563 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNT1O60563 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.24■■□□□ 1.15
CCNT1O60563 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.23■■□□□ 1.15
CCNT1O60563 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.23■■□□□ 1.15
CCNT1O60563 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.23■■□□□ 1.15
CCNT1O60563 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNT1O60563 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNT1O60563 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CCNT1O60563 TUBB8P6-201ENST00000436895 1288 ntBASIC22.23■■□□□ 1.15
CCNT1O60563 AL158047.1-201ENST00000445918 881 ntBASIC22.23■■□□□ 1.15
CCNT1O60563 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.23■■□□□ 1.15
CCNT1O60563 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CCNT1O60563 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.23■■□□□ 1.15
CCNT1O60563 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.23■■□□□ 1.15
CCNT1O60563 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNT1O60563 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNT1O60563 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
CCNT1O60563 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CCNT1O60563 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.22■■□□□ 1.15
CCNT1O60563 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNT1O60563 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNT1O60563 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms