Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCMT2O60294 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCMT2O60294 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 YBX1P10-201ENST00000444752 975 ntBASIC18.76■□□□□ 0.59
LCMT2O60294 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 AC133681.1-201ENST00000465482 601 ntBASIC18.76■□□□□ 0.59
LCMT2O60294 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LCMT2O60294 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 AL359736.2-201ENST00000621992 437 ntBASIC18.76■□□□□ 0.59
LCMT2O60294 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.76■□□□□ 0.59
LCMT2O60294 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.76■□□□□ 0.59
LCMT2O60294 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.75■□□□□ 0.59
LCMT2O60294 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.75■□□□□ 0.59
LCMT2O60294 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LCMT2O60294 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.75■□□□□ 0.59
LCMT2O60294 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.75■□□□□ 0.59
LCMT2O60294 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 AC142381.4-202ENST00000563973 229 ntBASIC18.75■□□□□ 0.59
LCMT2O60294 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.75■□□□□ 0.59
LCMT2O60294 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.75■□□□□ 0.59
LCMT2O60294 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LCMT2O60294 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCMT2O60294 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LCMT2O60294 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.74■□□□□ 0.59
LCMT2O60294 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.74■□□□□ 0.59
LCMT2O60294 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.74■□□□□ 0.59
LCMT2O60294 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LCMT2O60294 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 KRT18P16-201ENST00000510337 1294 ntBASIC18.74■□□□□ 0.59
LCMT2O60294 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.74■□□□□ 0.59
LCMT2O60294 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.74■□□□□ 0.59
LCMT2O60294 AC110285.5-201ENST00000611501 352 ntBASIC18.74■□□□□ 0.59
LCMT2O60294 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.74■□□□□ 0.59
LCMT2O60294 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCMT2O60294 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.74■□□□□ 0.59
LCMT2O60294 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.73■□□□□ 0.59
LCMT2O60294 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.73■□□□□ 0.59
LCMT2O60294 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.73■□□□□ 0.59
LCMT2O60294 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.73■□□□□ 0.59
LCMT2O60294 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LCMT2O60294 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.73■□□□□ 0.59
LCMT2O60294 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LCMT2O60294 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LCMT2O60294 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LCMT2O60294 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LCMT2O60294 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LCMT2O60294 GCSHP5-201ENST00000443090 522 ntBASIC18.72■□□□□ 0.59
LCMT2O60294 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.72■□□□□ 0.59
LCMT2O60294 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LCMT2O60294 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LCMT2O60294 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
LCMT2O60294 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms