Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK2O43353 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK2O43353 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RIPK2O43353 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RIPK2O43353 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
RIPK2O43353 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.89■□□□□ 0.77
RIPK2O43353 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.89■□□□□ 0.77
RIPK2O43353 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.89■□□□□ 0.77
RIPK2O43353 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 AC007322.4-201ENST00000509611 723 ntBASIC19.89■□□□□ 0.77
RIPK2O43353 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RIPK2O43353 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.89■□□□□ 0.77
RIPK2O43353 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.89■□□□□ 0.77
RIPK2O43353 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
RIPK2O43353 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.89■□□□□ 0.77
RIPK2O43353 AC100791.3-201ENST00000617619 330 ntBASIC19.89■□□□□ 0.77
RIPK2O43353 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
RIPK2O43353 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.89■□□□□ 0.77
RIPK2O43353 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RIPK2O43353 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RIPK2O43353 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RIPK2O43353 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.88■□□□□ 0.77
RIPK2O43353 MFSD11-216ENST00000590393 1141 ntBASIC19.88■□□□□ 0.77
RIPK2O43353 AC005837.3-201ENST00000612163 286 ntBASIC19.88■□□□□ 0.77
RIPK2O43353 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.88■□□□□ 0.77
RIPK2O43353 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.88■□□□□ 0.77
RIPK2O43353 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.88■□□□□ 0.77
RIPK2O43353 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RIPK2O43353 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RIPK2O43353 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.87■□□□□ 0.77
RIPK2O43353 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
RIPK2O43353 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RIPK2O43353 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.87■□□□□ 0.77
RIPK2O43353 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.87■□□□□ 0.77
RIPK2O43353 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.87■□□□□ 0.77
RIPK2O43353 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.87■□□□□ 0.77
RIPK2O43353 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK2O43353 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
RIPK2O43353 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.86■□□□□ 0.77
RIPK2O43353 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.86■□□□□ 0.77
RIPK2O43353 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.86■□□□□ 0.77
RIPK2O43353 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIPK2O43353 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.86■□□□□ 0.77
RIPK2O43353 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.86■□□□□ 0.77
RIPK2O43353 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.86■□□□□ 0.77
RIPK2O43353 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK2O43353 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK2O43353 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms