Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.99□□□□□ -0.17
PAX4O43316 PCDHAC2-203ENST00000615316 3011 ntBASIC13.99□□□□□ -0.17
PAX4O43316 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PAX4O43316 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.98□□□□□ -0.17
PAX4O43316 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 AC112907.3-201ENST00000577781 2400 ntBASIC13.98□□□□□ -0.17
PAX4O43316 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.98□□□□□ -0.17
PAX4O43316 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.98□□□□□ -0.17
PAX4O43316 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 PNMA6B-201ENST00000538162 1200 ntBASIC13.98□□□□□ -0.17
PAX4O43316 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.98□□□□□ -0.17
PAX4O43316 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.98□□□□□ -0.17
PAX4O43316 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.98□□□□□ -0.17
PAX4O43316 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.98□□□□□ -0.17
PAX4O43316 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 AC006557.6-201ENST00000623071 864 ntBASIC13.98□□□□□ -0.17
PAX4O43316 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
PAX4O43316 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.98□□□□□ -0.17
PAX4O43316 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX4O43316 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PAX4O43316 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
PAX4O43316 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PAX4O43316 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX4O43316 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.97□□□□□ -0.17
PAX4O43316 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX4O43316 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 RNA5SP413-201ENST00000516373 109 ntBASIC13.97□□□□□ -0.17
PAX4O43316 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX4O43316 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX4O43316 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.97□□□□□ -0.17
PAX4O43316 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX4O43316 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.97□□□□□ -0.17
PAX4O43316 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PAX4O43316 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX4O43316 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX4O43316 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.96□□□□□ -0.17
PAX4O43316 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX4O43316 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX4O43316 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PAX4O43316 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PAX4O43316 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX4O43316 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PAX4O43316 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX4O43316 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.96□□□□□ -0.17
PAX4O43316 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX4O43316 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
PAX4O43316 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.96□□□□□ -0.17
PAX4O43316 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PAX4O43316 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX4O43316 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX4O43316 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX4O43316 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.96□□□□□ -0.18
PAX4O43316 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms