Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA1O15239 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA1O15239 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA1O15239 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.4□□□□□ -0.27
NDUFA1O15239 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 AL049812.1-201ENST00000432563 2267 ntBASIC13.39□□□□□ -0.27
NDUFA1O15239 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.39□□□□□ -0.27
NDUFA1O15239 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 KRT19P1-201ENST00000405746 1186 ntBASIC13.39□□□□□ -0.27
NDUFA1O15239 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.39□□□□□ -0.27
NDUFA1O15239 PGM5P4-201ENST00000421970 445 ntBASIC13.39□□□□□ -0.27
NDUFA1O15239 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NDUFA1O15239 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.39□□□□□ -0.27
NDUFA1O15239 SLC7A5P1-201ENST00000568957 537 ntBASIC13.39□□□□□ -0.27
NDUFA1O15239 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.39□□□□□ -0.27
NDUFA1O15239 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.39□□□□□ -0.27
NDUFA1O15239 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NDUFA1O15239 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 AC007613.1-201ENST00000572811 2597 ntBASIC13.39□□□□□ -0.27
NDUFA1O15239 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.39□□□□□ -0.27
NDUFA1O15239 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NDUFA1O15239 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA1O15239 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA1O15239 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.38□□□□□ -0.27
NDUFA1O15239 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 MIR638-201ENST00000385237 100 ntBASIC13.38□□□□□ -0.27
NDUFA1O15239 AC097381.1-201ENST00000429019 1296 ntBASIC13.38□□□□□ -0.27
NDUFA1O15239 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NDUFA1O15239 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.38□□□□□ -0.27
NDUFA1O15239 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA1O15239 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 RBM17P2-201ENST00000616397 1405 ntBASIC13.38□□□□□ -0.27
NDUFA1O15239 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA1O15239 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.38□□□□□ -0.27
NDUFA1O15239 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NDUFA1O15239 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 CROCCP3-202ENST00000420820 1947 ntBASIC13.37□□□□□ -0.27
NDUFA1O15239 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms