Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SMAD9O15198 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 AC073648.6-201ENST00000641589 218 ntBASIC17.75■□□□□ 0.43
SMAD9O15198 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.74■□□□□ 0.43
SMAD9O15198 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.74■□□□□ 0.43
SMAD9O15198 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.74■□□□□ 0.43
SMAD9O15198 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.74■□□□□ 0.43
SMAD9O15198 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.74■□□□□ 0.43
SMAD9O15198 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SMAD9O15198 ITM2C-210ENST00000620962 501 ntBASIC17.74■□□□□ 0.43
SMAD9O15198 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 AL691432.2-201ENST00000607222 2038 ntBASIC17.74■□□□□ 0.43
SMAD9O15198 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD9O15198 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD9O15198 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMAD9O15198 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMAD9O15198 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD9O15198 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD9O15198 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD9O15198 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD9O15198 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.73■□□□□ 0.43
SMAD9O15198 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.73■□□□□ 0.43
SMAD9O15198 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.73■□□□□ 0.43
SMAD9O15198 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD9O15198 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD9O15198 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMAD9O15198 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD9O15198 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD9O15198 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 PHGDH-210ENST00000641115 1638 ntBASIC17.72■□□□□ 0.43
SMAD9O15198 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 AC112907.3-201ENST00000577781 2400 ntBASIC17.72■□□□□ 0.43
SMAD9O15198 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD9O15198 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 KRT18P29-201ENST00000397031 1267 ntBASIC17.72■□□□□ 0.43
SMAD9O15198 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD9O15198 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SMAD9O15198 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD9O15198 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD9O15198 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 TCF3P1-201ENST00000423021 1937 ntBASIC17.72■□□□□ 0.43
SMAD9O15198 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SMAD9O15198 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD9O15198 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms