Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD2O14647 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD2O14647 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC27.42■■□□□ 1.98
CHD2O14647 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD2O14647 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHD2O14647 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC27.42■■□□□ 1.98
CHD2O14647 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD2O14647 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHD2O14647 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
CHD2O14647 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD2O14647 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CHD2O14647 LINC01311-201ENST00000565162 1445 ntBASIC27.41■■□□□ 1.98
CHD2O14647 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC27.41■■□□□ 1.98
CHD2O14647 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.41■■□□□ 1.98
CHD2O14647 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD2O14647 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC27.41■■□□□ 1.98
CHD2O14647 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHD2O14647 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHD2O14647 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC27.4■■□□□ 1.98
CHD2O14647 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHD2O14647 PHB2-202ENST00000440277 996 ntTSL 5 BASIC27.4■■□□□ 1.98
CHD2O14647 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
CHD2O14647 AL160286.2-201ENST00000567150 934 ntBASIC27.4■■□□□ 1.98
CHD2O14647 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC27.4■■□□□ 1.98
CHD2O14647 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHD2O14647 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHD2O14647 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
CHD2O14647 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD2O14647 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC27.39■■□□□ 1.98
CHD2O14647 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC27.39■■□□□ 1.98
CHD2O14647 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC27.39■■□□□ 1.98
CHD2O14647 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHD2O14647 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
CHD2O14647 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CHD2O14647 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC27.39■■□□□ 1.97
CHD2O14647 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC27.39■■□□□ 1.97
CHD2O14647 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
CHD2O14647 KRT17P6-201ENST00000453795 1220 ntBASIC27.39■■□□□ 1.97
CHD2O14647 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CHD2O14647 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC27.39■■□□□ 1.97
CHD2O14647 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.39■■□□□ 1.97
CHD2O14647 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD2O14647 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC27.38■■□□□ 1.97
CHD2O14647 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD2O14647 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.38■■□□□ 1.97
CHD2O14647 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD2O14647 MIR3180-1-201ENST00000580374 94 ntBASIC27.38■■□□□ 1.97
CHD2O14647 MIR3180-3-201ENST00000584616 94 ntBASIC27.38■■□□□ 1.97
CHD2O14647 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CHD2O14647 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CHD2O14647 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CHD2O14647 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC27.38■■□□□ 1.97
CHD2O14647 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC27.37■■□□□ 1.97
CHD2O14647 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD2O14647 AL645929.1-201ENST00000420084 975 ntBASIC27.37■■□□□ 1.97
CHD2O14647 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD2O14647 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CHD2O14647 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD2O14647 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD2O14647 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD2O14647 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.37■■□□□ 1.97
CHD2O14647 GCSHP2-201ENST00000560971 527 ntBASIC27.37■■□□□ 1.97
CHD2O14647 IFNL4P1-201ENST00000607083 540 ntBASIC27.37■■□□□ 1.97
CHD2O14647 CR769767.2-201ENST00000622735 460 ntBASIC27.37■■□□□ 1.97
CHD2O14647 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC27.37■■□□□ 1.97
CHD2O14647 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.36■■□□□ 1.97
CHD2O14647 ILF2-202ENST00000368681 726 ntTSL 2 BASIC27.36■■□□□ 1.97
CHD2O14647 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.36■■□□□ 1.97
CHD2O14647 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC27.36■■□□□ 1.97
CHD2O14647 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CHD2O14647 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC27.36■■□□□ 1.97
CHD2O14647 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD2O14647 PLK5-205ENST00000642079 1969 ntBASIC27.35■■□□□ 1.97
CHD2O14647 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD2O14647 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD2O14647 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD2O14647 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms