Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 TFP1-202ENST00000475455 1573 ntBASIC19.52■□□□□ 0.71
CFAP99D6REC4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.71
CFAP99D6REC4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CFAP99D6REC4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CFAP99D6REC4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TSPY20P-201ENST00000450910 630 ntBASIC19.51■□□□□ 0.71
CFAP99D6REC4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP99D6REC4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP99D6REC4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.5■□□□□ 0.71
CFAP99D6REC4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP99D6REC4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.49■□□□□ 0.71
CFAP99D6REC4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 AC073648.6-201ENST00000641589 218 ntBASIC19.49■□□□□ 0.71
CFAP99D6REC4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 AP006587.1-201ENST00000534129 1502 ntBASIC19.49■□□□□ 0.71
CFAP99D6REC4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP99D6REC4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.49■□□□□ 0.71
CFAP99D6REC4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.48■□□□□ 0.71
CFAP99D6REC4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 AC128676.1-201ENST00000454392 318 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms