Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.35■□□□□ 0.37
NPIPB4C9JG80 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB4C9JG80 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NPIPB4C9JG80 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 AC018445.3-201ENST00000624177 1945 ntBASIC17.33■□□□□ 0.37
NPIPB4C9JG80 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB4C9JG80 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 TUBB8P6-201ENST00000436895 1288 ntBASIC17.33■□□□□ 0.36
NPIPB4C9JG80 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 AC008403.3-201ENST00000598924 454 ntBASIC17.33■□□□□ 0.36
NPIPB4C9JG80 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB4C9JG80 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms