Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
TVP23AA6NH52 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TVP23AA6NH52 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TVP23AA6NH52 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TVP23AA6NH52 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TVP23AA6NH52 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TVP23AA6NH52 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 MKRN4P-201ENST00000444706 1521 ntBASIC17.47■□□□□ 0.39
TVP23AA6NH52 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 GPX1P1-201ENST00000388829 606 ntBASIC17.47■□□□□ 0.39
TVP23AA6NH52 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 AC133552.2-202ENST00000575694 574 ntBASIC17.47■□□□□ 0.39
TVP23AA6NH52 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 Z82202.1-201ENST00000623446 1880 ntBASIC17.47■□□□□ 0.39
TVP23AA6NH52 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TVP23AA6NH52 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
TVP23AA6NH52 AC020763.4-201ENST00000623414 4170 ntBASIC17.47■□□□□ 0.39
TVP23AA6NH52 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 MIR663A-201ENST00000385250 93 ntBASIC17.46■□□□□ 0.39
TVP23AA6NH52 BX276092.2-201ENST00000417668 665 ntBASIC17.46■□□□□ 0.39
TVP23AA6NH52 CDCA4P2-201ENST00000441182 718 ntBASIC17.46■□□□□ 0.39
TVP23AA6NH52 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 AF201337.1-201ENST00000520239 748 ntBASIC17.46■□□□□ 0.39
TVP23AA6NH52 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 AL032819.2-201ENST00000624543 2162 ntBASIC17.46■□□□□ 0.39
TVP23AA6NH52 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TVP23AA6NH52 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TVP23AA6NH52 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TVP23AA6NH52 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.46■□□□□ 0.38
TVP23AA6NH52 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.46■□□□□ 0.38
TVP23AA6NH52 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.45■□□□□ 0.38
TVP23AA6NH52 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TVP23AA6NH52 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.45■□□□□ 0.38
TVP23AA6NH52 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TVP23AA6NH52 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TVP23AA6NH52 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
TVP23AA6NH52 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TVP23AA6NH52 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TVP23AA6NH52 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
TVP23AA6NH52 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TVP23AA6NH52 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TVP23AA6NH52 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.44■□□□□ 0.38
TVP23AA6NH52 AC018553.1-201ENST00000616682 1458 ntBASIC17.44■□□□□ 0.38
TVP23AA6NH52 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TVP23AA6NH52 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TVP23AA6NH52 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.44■□□□□ 0.38
TVP23AA6NH52 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TVP23AA6NH52 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms