Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 ZNF815P-204ENST00000434898 1737 ntBASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 AC069544.1-201ENST00000609399 999 ntBASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV5S1A1TA0A578 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TCRBV5S1A1TA0A578 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 AC104417.2-201ENST00000562989 1793 ntBASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV5S1A1TA0A578 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV5S1A1TA0A578 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV5S1A1TA0A578 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms