Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-4A0A1B0GX49 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-4A0A1B0GX49 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC005332.7-201ENST00000614046 2005 ntBASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC006557.6-201ENST00000623071 864 ntBASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-4A0A1B0GX49 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 RPS2P52-201ENST00000469610 820 ntBASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 PNMA6B-201ENST00000538162 1200 ntBASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-4A0A1B0GX49 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC069152.1-201ENST00000438030 544 ntBASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-4A0A1B0GX49 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 Z82202.1-201ENST00000623446 1880 ntBASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms