Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 BID-214ENST00000617586 542 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC093503.3-201ENST00000624917 2352 ntBASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 CYP2T1P-201ENST00000432607 1285 ntBASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 AL162430.1-201ENST00000480705 870 ntBASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC100791.3-201ENST00000617619 330 ntBASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF103-CHMP3A0A140T963 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 MIR5787-201ENST00000611784 55 ntBASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
RNF103-CHMP3A0A140T963 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 BCL2-203ENST00000589955 5011 ntBASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF103-CHMP3A0A140T963 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC069236.1-201ENST00000604339 616 ntBASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC105020.6-201ENST00000621523 1217 ntBASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF103-CHMP3A0A140T963 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 AC008694.1-202ENST00000636953 945 ntBASIC18.82■□□□□ 0.6
RNF103-CHMP3A0A140T963 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms