Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-4A0A0C4DH59 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.33■□□□□ 0.69
TRBV5-4A0A0C4DH59 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 KRT16P5-201ENST00000455284 522 ntBASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 RPPH1-201ENST00000516869 333 ntBASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 C1QBPP2-201ENST00000528754 825 ntBASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 C1QL1P1-201ENST00000568105 661 ntBASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC004264.1-201ENST00000608354 794 ntBASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-4A0A0C4DH59 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-4A0A0C4DH59 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC098590.1-201ENST00000468126 897 ntBASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 AL359736.2-201ENST00000621992 437 ntBASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 Z82202.1-201ENST00000623446 1880 ntBASIC19.31■□□□□ 0.68
TRBV5-4A0A0C4DH59 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRBV5-4A0A0C4DH59 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV5-4A0A0C4DH59 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms