Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 KRT18P20-201ENST00000548986 1279 ntBASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC004854.2-201ENST00000608450 1441 ntBASIC14.41□□□□□ -0.1
TRAV8-6A0A0B4J262 AC099398.1-201ENST00000567919 2776 ntBASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 MIR935-201ENST00000401179 91 ntBASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-6A0A0B4J262 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 KRT16P2-201ENST00000414673 1423 ntBASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-6A0A0B4J262 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV8-6A0A0B4J262 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms