Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 KRT18P22-201ENST00000402024 1347 ntBASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 TMPOP1-202ENST00000424642 1267 ntBASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 AC097488.1-201ENST00000507834 756 ntBASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 AP005242.2-201ENST00000580065 1175 ntBASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRAV19A0A0A6YYK7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 C2orf69P3-201ENST00000565542 1120 ntBASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 RN7SL850P-201ENST00000579959 291 ntBASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 AC011298.2-201ENST00000617989 482 ntBASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 RCC2P6-201ENST00000526625 1557 ntBASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV19A0A0A6YYK7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 AL512408.1-201ENST00000569378 2000 ntBASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 CRYGFP-201ENST00000418459 633 ntBASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 AC004951.3-201ENST00000418645 1148 ntBASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 AC130371.2-201ENST00000619443 611 ntBASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV19A0A0A6YYK7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV19A0A0A6YYK7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV19A0A0A6YYK7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 AC092865.7-201ENST00000641832 219 ntBASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRAV19A0A0A6YYK7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRAV19A0A0A6YYK7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV19A0A0A6YYK7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV19A0A0A6YYK7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV19A0A0A6YYK7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms