Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL162377.2-201ENST00000624532 337 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AF001550.2-201ENST00000636643 217 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 SGO1P2-201ENST00000429458 1589 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC140479.2-201ENST00000421567 3130 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL049737.1-201ENST00000413920 1403 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 SAMMSON-210ENST00000641260 1308 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LCN1P2-201ENST00000372030 223 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 RNU1-46P-201ENST00000384425 164 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 MIR16-1-201ENST00000385271 89 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP166-201ENST00000410812 305 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP91-201ENST00000410852 288 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC016907.1-201ENST00000419483 435 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 PAICSP7-201ENST00000419829 962 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC239367.3-201ENST00000428996 814 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LDHAP2-201ENST00000437325 985 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL034369.1-201ENST00000453808 477 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 RNU7-125P-201ENST00000458760 62 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC098799.3-201ENST00000506095 438 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC116353.3-201ENST00000511215 249 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 OR5BM1P-201ENST00000512021 366 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 RPL7L1P4-201ENST00000513004 707 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC116917.1-201ENST00000520558 305 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC090819.1-201ENST00000523800 1111 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ELOCP32-201ENST00000548625 324 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 MTCYBP33-201ENST00000575007 1130 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AL035410.2-201ENST00000604963 864 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC062022.1-201ENST00000451026 1684 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AC095038.1-201ENST00000429248 1591 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 BRAFP1-201ENST00000445336 2703 ntBASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRIM55Q9BYV6 SGO1P1-201ENST00000603525 1447 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 CASC19-228ENST00000641414 1684 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 Y_RNA.318-201ENST00000365131 97 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RNA5SP152-201ENST00000365184 110 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL360271.1-201ENST00000395679 510 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL050335.1-201ENST00000396909 869 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms