Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC004853.1-201ENST00000604902 698 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AL136363.1-201ENST00000605349 337 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 MIR6810-201ENST00000622701 70 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 AC011453.1-201ENST00000597619 2239 ntBASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL25A1Q9BXS0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC074281.1-201ENST00000436419 2081 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC079777.1-201ENST00000623836 1953 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RNU1-19P-201ENST00000363306 165 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RN7SKP103-201ENST00000363848 320 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.315-201ENST00000365117 102 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 SNORD42.2-201ENST00000365570 69 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.409-201ENST00000383990 98 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CAPNS1P1-201ENST00000401029 633 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RNU6-847P-201ENST00000411115 108 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 SEPT7P8-201ENST00000413308 775 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RPA2P2-201ENST00000419698 796 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AL365400.1-201ENST00000431854 640 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC092106.2-201ENST00000436597 487 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 COL11A2P1-205ENST00000441798 676 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AL731563.1-201ENST00000442202 214 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 BUD31P2-201ENST00000449374 300 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC006480.1-201ENST00000449887 378 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RPS20P20-201ENST00000460498 340 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RPS4XP12-201ENST00000461747 709 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RN7SL799P-201ENST00000475891 298 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC091544.1-201ENST00000484702 348 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC090096.1-201ENST00000489168 390 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RNU6-406P-201ENST00000516470 107 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 Y_RNA.711-201ENST00000516993 102 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CDH12P4-201ENST00000517835 295 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CDH12P3-201ENST00000517935 295 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CDH12P1-201ENST00000518435 295 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AP002748.2-201ENST00000528671 348 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC005084.1-201ENST00000605160 304 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC092807.2-201ENST00000609367 243 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC005962.2-201ENST00000611427 652 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AL136140.2-201ENST00000624717 1705 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 MARK2P4-201ENST00000503381 2380 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC068860.1-201ENST00000623701 3736 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 AC068733.2-201ENST00000605434 1418 ntBASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.26□□□□□ -1.25
COL25A1Q9BXS0 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 AC061975.7-201ENST00000592016 2692 ntBASIC7.25□□□□□ -1.25
COL25A1Q9BXS0 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms