Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VRK1Q99986 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.67□□□□□ -1.5
VRK1Q99986 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VRK1Q99986 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VRK1Q99986 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 PSG10P-201ENST00000501199 1500 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 VPS35P1-201ENST00000563400 1518 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC017079.1-201ENST00000333650 415 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 TMSB4XP2-201ENST00000335179 210 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 RN7SKP237-201ENST00000364663 301 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 RNU5A-2P-201ENST00000384337 116 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 SNORA40.2-201ENST00000390847 128 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AL079342.2-201ENST00000403367 482 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AL590084.1-201ENST00000407885 387 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AL929472.1-201ENST00000417484 429 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 AL008629.1-201ENST00000438615 184 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 MYO5BP2-201ENST00000449815 1277 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC010468.1-201ENST00000461022 817 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.66□□□□□ -1.5
VRK1Q99986 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC104687.1-201ENST00000485829 412 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.66□□□□□ -1.5
VRK1Q99986 BCAS2P1-201ENST00000528022 632 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 YWHABP2-201ENST00000540201 713 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VRK1Q99986 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 MT1CP-201ENST00000567054 174 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC109446.2-201ENST00000567872 497 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 RN7SL230P-201ENST00000580835 303 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 SYPL1P2-201ENST00000582878 727 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 AC040904.1-201ENST00000590850 223 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK1Q99986 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.66□□□□□ -1.5
VRK1Q99986 WBP1LP12-201ENST00000604449 331 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 DPRXP5-201ENST00000604662 539 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC114477.1-201ENST00000605097 605 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC024589.2-201ENST00000605642 1294 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 AL589743.6-201ENST00000611025 117 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AL139407.1-201ENST00000613826 1175 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC004241.2-201ENST00000614562 444 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
VRK1Q99986 RACGAP1P-201ENST00000550663 1879 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK1Q99986 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 AC005261.4-201ENST00000600047 1385 ntBASIC5.66□□□□□ -1.5
VRK1Q99986 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK1Q99986 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VRK1Q99986 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.65□□□□□ -1.5
VRK1Q99986 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VRK1Q99986 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VRK1Q99986 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VRK1Q99986 AC023245.2-201ENST00000530760 2978 ntBASIC5.65□□□□□ -1.5
VRK1Q99986 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.65□□□□□ -1.5
VRK1Q99986 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VRK1Q99986 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.65□□□□□ -1.5
VRK1Q99986 RNA5SP232-201ENST00000364144 119 ntBASIC5.65□□□□□ -1.5
VRK1Q99986 RN7SKP171-201ENST00000364417 303 ntBASIC5.65□□□□□ -1.5
VRK1Q99986 SNORA70.3-201ENST00000365075 132 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms