Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 GLRXP2-201ENST00000555594 321 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 HIRAP1-201ENST00000605318 787 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AL031601.1-201ENST00000605702 394 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 NANOGP3-201ENST00000605855 286 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC112503.2-201ENST00000609005 552 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-368P-201ENST00000620928 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-538P-201ENST00000622329 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC105105.5-201ENST00000622635 1294 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC090617.9-201ENST00000623751 147 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 FRG1DP-201ENST00000635586 771 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC099654.9-201ENST00000637055 678 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDK5RAP3Q96JB5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 RNU4-27P-201ENST00000410889 139 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 NIFKP3-201ENST00000417799 865 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 DNAJA1P5-201ENST00000440278 943 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 RPSAP39-201ENST00000467439 883 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 PDCL3P4-201ENST00000489621 720 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 GTF2IP9-201ENST00000502460 301 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 SCARNA6.1-201ENST00000516989 238 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AL121594.4-201ENST00000556211 1196 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 YWHAZP1-201ENST00000556286 722 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 BMS1P7-201ENST00000602440 1052 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC026741.1-201ENST00000605892 482 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AP000864.1-201ENST00000609424 650 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC090607.5-201ENST00000615692 224 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 AC007342.5-201ENST00000571340 2142 ntBASIC6.46□□□□□ -1.38
CDK5RAP3Q96JB5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RNU1-150P-201ENST00000362491 162 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AL024507.1-201ENST00000412741 274 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms