Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 RNA5SP319-201ENST00000362768 119 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AL158827.1-201ENST00000416300 391 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC006065.1-201ENST00000422539 802 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 MTND4LP13-201ENST00000425022 298 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 H3F3BP1-201ENST00000440551 403 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 COX6B1P2-201ENST00000489624 230 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC006499.3-201ENST00000506077 748 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC121161.1-201ENST00000510606 652 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 RNU6-415P-201ENST00000516252 97 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 MIR2117-201ENST00000516780 80 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AP003355.1-201ENST00000518956 587 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 CBX3P2-202ENST00000583365 535 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC063977.5-201ENST00000601044 974 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC073137.1-201ENST00000605636 634 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC016597.2-201ENST00000613256 341 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC022960.3-201ENST00000619794 441 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 CASC19-264ENST00000641912 1184 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AP004607.3-201ENST00000530354 3915 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 AC025470.1-201ENST00000510053 2032 ntBASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC079298.1-201ENST00000625026 1619 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 CASC19-261ENST00000641853 1638 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MIR16-2-201ENST00000362117 81 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL034403.1-201ENST00000399414 885 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC009804.1-201ENST00000400949 179 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC007568.1-201ENST00000422912 471 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC093084.1-201ENST00000424233 687 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 NANOGP4-201ENST00000427230 913 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AL731534.1-201ENST00000434711 269 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 MTATP6P14-201ENST00000455189 673 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 RN7SL51P-201ENST00000468230 285 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 RPS3AP15-201ENST00000483874 781 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 NRBF2P4-201ENST00000520874 850 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 HAUS1P3-201ENST00000523909 662 ntBASIC5.78□□□□□ -1.48
HMGB4Q8WW32 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB4Q8WW32 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms