Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR4436B2-201ENST00000581415 91 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 MIR4436B1-201ENST00000583272 91 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC004890.3-201ENST00000605566 1095 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AL158062.1-201ENST00000619632 745 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AL512283.1-201ENST00000606756 1384 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AL731532.1-201ENST00000623972 4236 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 RNA5SP30-201ENST00000365552 115 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 NIFKP3-201ENST00000417799 865 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AL133325.1-201ENST00000421090 382 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC021876.1-201ENST00000425959 359 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 RPS26P4-201ENST00000431743 355 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 ZNF965P-201ENST00000432501 817 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AL162739.1-201ENST00000450606 307 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 VDAC2P4-201ENST00000452925 711 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AL603882.1-201ENST00000463059 681 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 RPS18P6-201ENST00000476880 458 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC093770.1-201ENST00000511559 571 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 CKS1BP1-201ENST00000555221 240 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 SNORD39.2-201ENST00000579995 76 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 MIR132-201ENST00000591554 101 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AL136370.1-201ENST00000608166 691 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 OR8G7P-201ENST00000616658 848 ntBASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HERC6Q8IVU3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HERC6Q8IVU3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC083837.1-201ENST00000565297 2994 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AL672167.2-201ENST00000377164 879 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 MTND4P24-201ENST00000424002 397 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC009784.1-201ENST00000426484 460 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AL731534.1-201ENST00000434711 269 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 AC006326.1-201ENST00000445465 787 ntBASIC6.14□□□□□ -1.43
HERC6Q8IVU3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HERC6Q8IVU3 MIR2117-201ENST00000516780 80 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms