Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 RPL5P22-201ENST00000480199 884 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 OR5M14P-201ENST00000506803 618 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC092709.1-201ENST00000521355 1045 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 EIF1AXP2-201ENST00000555940 413 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AGGF1P7-201ENST00000562369 913 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 RN7SL290P-201ENST00000578661 300 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC090953.1-201ENST00000604305 1092 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC016769.4-201ENST00000616893 535 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC007683.2-201ENST00000624681 714 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC099654.6-201ENST00000636487 512 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC235565.1-201ENST00000456962 1325 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 CASC19-248ENST00000641674 1356 ntBASIC5.13□□□□□ -1.59
CCDC71Q8IV32 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC71Q8IV32 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC003985.2-201ENST00000562268 1669 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC100757.1-201ENST00000616872 1835 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC083843.2-201ENST00000568248 6253 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 RNU1-19P-201ENST00000363306 165 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 RPL35AP24-201ENST00000413846 330 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 NIFKP3-201ENST00000417799 865 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC013268.2-201ENST00000420753 337 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 NANOGP9-201ENST00000439890 892 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC008410.1-201ENST00000483777 339 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC073610.1-201ENST00000489971 396 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 RN7SL547P-201ENST00000490793 290 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 CCNHP1-201ENST00000513311 678 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 IGLV3-24-201ENST00000517477 197 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC021678.3-201ENST00000517893 476 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC044860.2-201ENST00000561005 179 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 FKBP1AP1-201ENST00000594588 318 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AL359513.1-201ENST00000614364 557 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AC005840.5-201ENST00000619166 599 ntBASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71Q8IV32 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 AC007342.5-201ENST00000571340 2142 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71Q8IV32 AC092681.1-201ENST00000297369 291 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 AL159987.1-201ENST00000347911 293 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 SNORA58B-201ENST00000364259 136 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 RNA5SP241-201ENST00000391326 114 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 PPIAP9-201ENST00000403866 498 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 SPTLC1P2-201ENST00000407089 121 ntBASIC5.11□□□□□ -1.59
CCDC71Q8IV32 AC007394.1-201ENST00000421941 531 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms