Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXF1Q12946 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
FOXF1Q12946 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
FOXF1Q12946 OR52B5P-202ENST00000641118 1110 ntBASIC4.75□□□□□ -1.65
FOXF1Q12946 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
FOXF1Q12946 AC112198.2-201ENST00000426589 6996 ntBASIC4.75□□□□□ -1.65
FOXF1Q12946 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 AC023632.6-201ENST00000624338 2177 ntBASIC4.75□□□□□ -1.65
FOXF1Q12946 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 AC063923.1-201ENST00000478982 1619 ntBASIC4.75□□□□□ -1.65
FOXF1Q12946 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXF1Q12946 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXF1Q12946 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
FOXF1Q12946 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
FOXF1Q12946 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
FOXF1Q12946 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 RNU1-43P-201ENST00000365052 165 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 RNA5SP223-201ENST00000365174 120 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
FOXF1Q12946 SNORA48.4-201ENST00000391089 134 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 GTF3AP1-201ENST00000416942 1004 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 SETP9-201ENST00000423837 832 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 HSPD1P12-201ENST00000429127 1069 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXF1Q12946 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 AC018638.3-201ENST00000461273 132 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 RPS21P4-201ENST00000487122 248 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 HIGD1AP14-201ENST00000507617 282 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 GTF2F2P1-201ENST00000511083 675 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 AC012400.1-201ENST00000518452 381 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.74□□□□□ -1.65
FOXF1Q12946 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.74□□□□□ -1.65
FOXF1Q12946 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 AC004825.1-201ENST00000555068 586 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXF1Q12946 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 MIR1269B-201ENST00000580405 75 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
FOXF1Q12946 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.74□□□□□ -1.65
FOXF1Q12946 SUMO2P15-201ENST00000604285 278 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 AC126915.2-201ENST00000610957 190 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXF1Q12946 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
FOXF1Q12946 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXF1Q12946 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.74□□□□□ -1.65
FOXF1Q12946 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
FOXF1Q12946 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXF1Q12946 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXF1Q12946 AC235565.1-201ENST00000456962 1325 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXF1Q12946 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AC006484.1-201ENST00000435086 1884 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXF1Q12946 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 OR8V1P-201ENST00000395193 873 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 DUTP5-201ENST00000406790 469 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXF1Q12946 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 EI24P4-201ENST00000423683 1078 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AL161722.2-201ENST00000434731 981 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXF1Q12946 RPL12P18-201ENST00000437175 325 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 GAPDHP58-201ENST00000438477 1006 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 RPS29P10-201ENST00000439197 166 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AURKAPS1-201ENST00000451805 1212 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 DNAJB5P1-201ENST00000454004 806 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 RN7SL172P-201ENST00000460535 303 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXF1Q12946 AC024940.3-201ENST00000538551 316 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXF1Q12946 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXF1Q12946 HMGN2P47-201ENST00000559378 272 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 AC023389.2-201ENST00000580031 955 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms