Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.71□□□□□ -1.66
VBP1P61758 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.71□□□□□ -1.66
VBP1P61758 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 RNU6-984P-201ENST00000363236 109 ntBASIC4.71□□□□□ -1.66
VBP1P61758 RNU1-65P-201ENST00000363919 148 ntBASIC4.71□□□□□ -1.66
VBP1P61758 RNA5SP500-201ENST00000364486 119 ntBASIC4.71□□□□□ -1.66
VBP1P61758 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 MIR589-201ENST00000385238 99 ntBASIC4.71□□□□□ -1.66
VBP1P61758 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.71□□□□□ -1.66
VBP1P61758 CDY17P-201ENST00000414121 1282 ntBASIC4.71□□□□□ -1.66
VBP1P61758 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
VBP1P61758 AC013268.2-201ENST00000420753 337 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 CDY8P-201ENST00000428380 1279 ntBASIC4.71□□□□□ -1.66
VBP1P61758 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.71□□□□□ -1.66
VBP1P61758 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 CDY20P-201ENST00000447528 1279 ntBASIC4.71□□□□□ -1.66
VBP1P61758 BX842559.2-201ENST00000451418 605 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AP003385.3-201ENST00000472498 287 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AC092754.1-201ENST00000472975 479 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.71□□□□□ -1.66
VBP1P61758 AL158068.1-201ENST00000506116 616 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 NDUFB4P12-201ENST00000513465 390 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.71□□□□□ -1.66
VBP1P61758 AC024267.2-201ENST00000582737 417 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.71□□□□□ -1.66
VBP1P61758 AC012368.3-201ENST00000604190 219 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AC073389.3-201ENST00000609434 935 ntBASIC4.71□□□□□ -1.66
VBP1P61758 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 AC016542.2-201ENST00000624201 619 ntBASIC4.71□□□□□ -1.66
VBP1P61758 AL355480.4-201ENST00000626823 69 ntBASIC4.71□□□□□ -1.66
VBP1P61758 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.71□□□□□ -1.66
VBP1P61758 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
VBP1P61758 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.71□□□□□ -1.66
VBP1P61758 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.71□□□□□ -1.66
VBP1P61758 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VBP1P61758 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 MIPEPP2-201ENST00000422560 1819 ntBASIC4.7□□□□□ -1.66
VBP1P61758 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 OR7E25P-201ENST00000344844 931 ntBASIC4.7□□□□□ -1.66
VBP1P61758 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VBP1P61758 PSMA6P1-201ENST00000400275 741 ntBASIC4.7□□□□□ -1.66
VBP1P61758 NCSTNP1-201ENST00000406229 144 ntBASIC4.7□□□□□ -1.66
VBP1P61758 RN7SKP199-201ENST00000410325 305 ntBASIC4.7□□□□□ -1.66
VBP1P61758 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.7□□□□□ -1.66
VBP1P61758 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.7□□□□□ -1.66
VBP1P61758 EIF4A1P1-201ENST00000420241 934 ntBASIC4.7□□□□□ -1.66
VBP1P61758 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.7□□□□□ -1.66
VBP1P61758 RPS12P5-201ENST00000423449 371 ntBASIC4.7□□□□□ -1.66
VBP1P61758 GAPDHP58-201ENST00000438477 1006 ntBASIC4.7□□□□□ -1.66
VBP1P61758 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.7□□□□□ -1.66
VBP1P61758 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.7□□□□□ -1.66
VBP1P61758 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.7□□□□□ -1.66
VBP1P61758 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.7□□□□□ -1.66
VBP1P61758 AC073358.1-201ENST00000505671 684 ntBASIC4.7□□□□□ -1.66
VBP1P61758 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 HMGB3P13-201ENST00000511263 607 ntBASIC4.7□□□□□ -1.66
VBP1P61758 KCTD9P6-201ENST00000522306 950 ntBASIC4.7□□□□□ -1.66
VBP1P61758 WBP1LP3-201ENST00000523033 208 ntBASIC4.7□□□□□ -1.66
VBP1P61758 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.7□□□□□ -1.66
VBP1P61758 HNRNPRP2-201ENST00000528421 743 ntBASIC4.7□□□□□ -1.66
VBP1P61758 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.7□□□□□ -1.66
VBP1P61758 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.7□□□□□ -1.66
VBP1P61758 AC018695.5-201ENST00000605872 315 ntBASIC4.7□□□□□ -1.66
VBP1P61758 AL159169.2-201ENST00000610061 1269 ntBASIC4.7□□□□□ -1.66
VBP1P61758 MIR6762-201ENST00000613340 86 ntBASIC4.7□□□□□ -1.66
VBP1P61758 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.7□□□□□ -1.66
VBP1P61758 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.7□□□□□ -1.66
VBP1P61758 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VBP1P61758 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 IFIT1P1-201ENST00000400497 1449 ntBASIC4.7□□□□□ -1.66
VBP1P61758 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VBP1P61758 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.7□□□□□ -1.66
VBP1P61758 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.7□□□□□ -1.66
VBP1P61758 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VBP1P61758 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.69□□□□□ -1.66
VBP1P61758 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 AC074029.4-201ENST00000624796 1859 ntBASIC4.69□□□□□ -1.66
VBP1P61758 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VBP1P61758 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.69□□□□□ -1.66
VBP1P61758 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.69□□□□□ -1.66
VBP1P61758 MIR708-201ENST00000390708 88 ntBASIC4.69□□□□□ -1.66
VBP1P61758 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VBP1P61758 U3.32-201ENST00000408116 212 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms