Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC106806.2-201ENST00000509365 500 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AC074255.1-201ENST00000511259 501 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH11P55287 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC027026.1-201ENST00000532323 742 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 AL356801.1-201ENST00000559320 294 ntBASIC5.11□□□□□ -1.59
CDH11P55287 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC074276.2-201ENST00000619891 348 ntBASIC5.11□□□□□ -1.59
CDH11P55287 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AC079097.1-201ENST00000512187 1399 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AL512283.1-201ENST00000606756 1384 ntBASIC5.11□□□□□ -1.59
CDH11P55287 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 MTCO1P11-201ENST00000429111 1528 ntBASIC5.11□□□□□ -1.59
CDH11P55287 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 OR10AB1P-202ENST00000641219 1686 ntBASIC5.11□□□□□ -1.59
CDH11P55287 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 AC093849.1-201ENST00000563631 2209 ntBASIC5.11□□□□□ -1.59
CDH11P55287 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CDH11P55287 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 SNORA51.1-201ENST00000363243 140 ntBASIC5.1□□□□□ -1.59
CDH11P55287 RNA5SP242-201ENST00000364171 118 ntBASIC5.1□□□□□ -1.59
CDH11P55287 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 OR7E101P-201ENST00000400428 513 ntBASIC5.1□□□□□ -1.59
CDH11P55287 SDHDP6-201ENST00000414693 480 ntBASIC5.1□□□□□ -1.59
CDH11P55287 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 MTCO1P51-201ENST00000427672 1060 ntBASIC5.1□□□□□ -1.59
CDH11P55287 MTCO1P45-201ENST00000431457 267 ntBASIC5.1□□□□□ -1.59
CDH11P55287 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH11P55287 AC064862.4-201ENST00000442180 334 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 YWHAEP1-201ENST00000453697 763 ntBASIC5.1□□□□□ -1.59
CDH11P55287 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 RN7SL273P-201ENST00000481561 299 ntBASIC5.1□□□□□ -1.59
CDH11P55287 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 AC008628.1-201ENST00000508663 265 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC109481.1-201ENST00000509173 282 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 SNORA26.10-201ENST00000516427 141 ntBASIC5.1□□□□□ -1.59
CDH11P55287 CYCSP22-201ENST00000517555 339 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 AC019227.1-201ENST00000526902 510 ntBASIC5.1□□□□□ -1.59
CDH11P55287 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CDH11P55287 AC019322.1-201ENST00000571869 389 ntBASIC5.1□□□□□ -1.59
CDH11P55287 MTND2P13-201ENST00000577438 1039 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH11P55287 AC015802.2-201ENST00000589690 189 ntBASIC5.1□□□□□ -1.59
CDH11P55287 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 AC016542.1-201ENST00000608259 493 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AP000894.4-201ENST00000610185 483 ntBASIC5.1□□□□□ -1.59
CDH11P55287 RN7SL787P-201ENST00000613000 284 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC004477.3-201ENST00000614061 590 ntBASIC5.1□□□□□ -1.59
CDH11P55287 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 AC073869.7-201ENST00000640874 297 ntBASIC5.1□□□□□ -1.59
CDH11P55287 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH11P55287 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDH11P55287 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH11P55287 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CDH11P55287 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms