Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC016252.1-201ENST00000609721 474 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC005840.5-201ENST00000619166 599 ntBASIC5.49□□□□□ -1.53
CDH6P55285 MTCO1P1-201ENST00000624263 1081 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AL049767.1-202ENST00000637826 242 ntBASIC5.49□□□□□ -1.53
CDH6P55285 AC074101.1-201ENST00000637861 241 ntBASIC5.49□□□□□ -1.53
CDH6P55285 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 AC023421.1-201ENST00000590535 1785 ntBASIC5.49□□□□□ -1.53
CDH6P55285 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH6P55285 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH6P55285 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH6P55285 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH6P55285 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH6P55285 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH6P55285 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH6P55285 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH6P55285 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CDH6P55285 MIR589-201ENST00000385238 99 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC009804.1-201ENST00000400949 179 ntBASIC5.48□□□□□ -1.53
CDH6P55285 RN7SKP206-201ENST00000410823 293 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AL390774.1-201ENST00000411924 246 ntBASIC5.48□□□□□ -1.53
CDH6P55285 RPL12P9-201ENST00000412942 488 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AL133325.1-201ENST00000421090 382 ntBASIC5.48□□□□□ -1.53
CDH6P55285 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
CDH6P55285 RPSAP41-201ENST00000439695 860 ntBASIC5.48□□□□□ -1.53
CDH6P55285 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH6P55285 RPL5P25-201ENST00000441148 775 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH6P55285 AC090602.1-201ENST00000469695 252 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC108693.1-201ENST00000496068 432 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC111000.5-201ENST00000506559 1178 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH6P55285 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH6P55285 RNA5SP373-201ENST00000517271 95 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH6P55285 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH6P55285 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH6P55285 AC079395.2-201ENST00000610982 737 ntBASIC5.48□□□□□ -1.53
CDH6P55285 AC007204.2-201ENST00000615022 616 ntBASIC5.48□□□□□ -1.53
CDH6P55285 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH6P55285 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH6P55285 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH6P55285 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH6P55285 AC002525.1-201ENST00000624392 1622 ntBASIC5.48□□□□□ -1.53
CDH6P55285 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH6P55285 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH6P55285 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH6P55285 MUC2-202ENST00000613187 4845 ntBASIC5.48□□□□□ -1.53
CDH6P55285 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH6P55285 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 AC026523.2-201ENST00000625039 7739 ntBASIC5.47□□□□□ -1.53
CDH6P55285 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH6P55285 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH6P55285 RNU1-149P-201ENST00000390870 161 ntBASIC5.47□□□□□ -1.53
CDH6P55285 RNA5SP339-201ENST00000390987 122 ntBASIC5.47□□□□□ -1.53
CDH6P55285 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 GNG5P5-201ENST00000420444 220 ntBASIC5.47□□□□□ -1.53
CDH6P55285 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 CLUHP1-201ENST00000435012 1190 ntBASIC5.47□□□□□ -1.53
CDH6P55285 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH6P55285 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 GAPDHP14-201ENST00000450472 937 ntBASIC5.47□□□□□ -1.53
CDH6P55285 DNAJB5P1-201ENST00000454004 806 ntBASIC5.47□□□□□ -1.53
CDH6P55285 AC108161.1-201ENST00000461060 402 ntBASIC5.47□□□□□ -1.53
CDH6P55285 AL133445.1-201ENST00000467051 452 ntBASIC5.47□□□□□ -1.53
CDH6P55285 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 AC106872.4-201ENST00000510050 523 ntBASIC5.47□□□□□ -1.53
CDH6P55285 BX510359.5-201ENST00000515651 304 ntBASIC5.47□□□□□ -1.53
CDH6P55285 RNU6-941P-201ENST00000516346 108 ntBASIC5.47□□□□□ -1.53
CDH6P55285 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH6P55285 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 RN7SL708P-201ENST00000580952 299 ntBASIC5.47□□□□□ -1.53
CDH6P55285 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH6P55285 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 AL359513.1-201ENST00000614364 557 ntBASIC5.47□□□□□ -1.53
CDH6P55285 FRG1EP-201ENST00000634469 770 ntBASIC5.47□□□□□ -1.53
CDH6P55285 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH6P55285 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH6P55285 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH6P55285 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH6P55285 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH6P55285 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.53
CDH6P55285 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDH6P55285 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms