Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
PTPN5P54829 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.17□□□□□ -1.1
PTPN5P54829 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTPN5P54829 OR8B9P-202ENST00000642028 5216 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 AL512646.1-201ENST00000269395 1077 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 OR9K1P-201ENST00000326513 941 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 RPL7P26-201ENST00000333817 754 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PTPN5P54829 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 RN7SKP6-201ENST00000364795 319 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 RNU6-187P-201ENST00000384139 106 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 API5P2-201ENST00000397055 1498 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 SOD1P1-201ENST00000407803 440 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 MIR1272-201ENST00000408106 129 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AL603650.1-201ENST00000412680 240 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AC004986.1-201ENST00000414855 607 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 MCFD2P1-201ENST00000417812 300 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 RBM6-203ENST00000421682 684 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 NRBF2P3-201ENST00000432731 865 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AL606489.2-201ENST00000433886 234 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 SEPT7P5-201ENST00000434048 306 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPN5P54829 PPIAP32-201ENST00000449940 472 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 RPLP0P1-201ENST00000457002 361 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 Y_RNA.635-201ENST00000459041 101 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPN5P54829 RPL23AP37-201ENST00000479658 549 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 GAPDHP39-201ENST00000481866 979 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 RPL7P38-201ENST00000488396 739 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC023194.1-201ENST00000493084 308 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 RNU6-408P-201ENST00000515910 100 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 Y_RNA.672-201ENST00000516289 104 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC091982.1-201ENST00000518134 520 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPN5P54829 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PTPN5P54829 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC138207.8-204ENST00000579588 527 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC010323.2-201ENST00000596405 594 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPN5P54829 AC087763.1-201ENST00000603391 286 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 APOOP1-201ENST00000604695 592 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 CASC19-221ENST00000641309 1382 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
PTPN5P54829 HERC2P5-201ENST00000562687 3825 ntBASIC8.16□□□□□ -1.1
PTPN5P54829 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPN5P54829 RNF6P1-201ENST00000444889 1784 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.1
PTPN5P54829 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 AC127459.1-201ENST00000563129 2768 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 Y_RNA.153-201ENST00000363615 91 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 RNA5SP429-201ENST00000363688 109 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPN5P54829 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PTPN5P54829 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 SNORD15A-201ENST00000384214 148 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PTPN5P54829 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.15□□□□□ -1.1
PTPN5P54829 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPN5P54829 AC011753.4-201ENST00000417974 311 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 AL451054.2-201ENST00000420896 202 ntBASIC8.15□□□□□ -1.1
PTPN5P54829 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.15□□□□□ -1.1
PTPN5P54829 AC139712.2-201ENST00000424302 339 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms