Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.46□□□□□ -1.53
HTTP42858 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HTTP42858 RPS27AP16-201ENST00000492222 470 ntBASIC5.46□□□□□ -1.53
HTTP42858 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.46□□□□□ -1.53
HTTP42858 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.46□□□□□ -1.53
HTTP42858 CYCSP1-201ENST00000604815 315 ntBASIC5.46□□□□□ -1.53
HTTP42858 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.46□□□□□ -1.53
HTTP42858 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
HTTP42858 MSL3P1-202ENST00000440028 1468 ntBASIC5.46□□□□□ -1.53
HTTP42858 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC5.46□□□□□ -1.53
HTTP42858 AC017104.4-201ENST00000636283 1592 ntBASIC5.46□□□□□ -1.53
HTTP42858 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HTTP42858 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HTTP42858 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
HTTP42858 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
HTTP42858 AP005432.1-201ENST00000580891 3485 ntBASIC5.46□□□□□ -1.53
HTTP42858 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HTTP42858 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.46□□□□□ -1.54
HTTP42858 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 ACTR3P2-201ENST00000439585 1257 ntBASIC5.46□□□□□ -1.54
HTTP42858 HSFY6P-201ENST00000445573 403 ntBASIC5.46□□□□□ -1.54
HTTP42858 RPL23AP2-201ENST00000471227 466 ntBASIC5.46□□□□□ -1.54
HTTP42858 RPL36AP41-201ENST00000493820 306 ntBASIC5.46□□□□□ -1.54
HTTP42858 RPS24P16-201ENST00000497294 392 ntBASIC5.46□□□□□ -1.54
HTTP42858 AC026726.1-201ENST00000512859 601 ntBASIC5.46□□□□□ -1.54
HTTP42858 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.46□□□□□ -1.54
HTTP42858 AP003400.2-201ENST00000624036 666 ntBASIC5.46□□□□□ -1.54
HTTP42858 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.46□□□□□ -1.54
HTTP42858 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.46□□□□□ -1.54
HTTP42858 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HTTP42858 AP001029.2-203ENST00000589795 4910 ntBASIC5.46□□□□□ -1.54
HTTP42858 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HTTP42858 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.45□□□□□ -1.54
HTTP42858 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.45□□□□□ -1.54
HTTP42858 NUTF2P3-201ENST00000448540 384 ntBASIC5.45□□□□□ -1.54
HTTP42858 OR8R1P-201ENST00000543943 764 ntBASIC5.45□□□□□ -1.54
HTTP42858 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.45□□□□□ -1.54
HTTP42858 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.45□□□□□ -1.54
HTTP42858 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HTTP42858 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HTTP42858 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 RPS12P10-201ENST00000427031 377 ntBASIC5.45□□□□□ -1.54
HTTP42858 RPL7L1P8-201ENST00000469911 741 ntBASIC5.45□□□□□ -1.54
HTTP42858 AC073073.1-201ENST00000493920 463 ntBASIC5.45□□□□□ -1.54
HTTP42858 AC024220.1-201ENST00000603675 484 ntBASIC5.45□□□□□ -1.54
HTTP42858 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.45□□□□□ -1.54
HTTP42858 VN1R34P-201ENST00000447387 883 ntBASIC5.45□□□□□ -1.54
HTTP42858 FTH1P25-201ENST00000447665 469 ntBASIC5.45□□□□□ -1.54
HTTP42858 RPL17P2-201ENST00000491913 451 ntBASIC5.45□□□□□ -1.54
HTTP42858 IGLVIV-65-201ENST00000517313 360 ntBASIC5.45□□□□□ -1.54
HTTP42858 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.45□□□□□ -1.54
HTTP42858 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.45□□□□□ -1.54
HTTP42858 AC069200.1-201ENST00000609511 323 ntBASIC5.45□□□□□ -1.54
HTTP42858 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HTTP42858 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HTTP42858 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HTTP42858 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.44□□□□□ -1.54
HTTP42858 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 RN7SL810P-201ENST00000493031 276 ntBASIC5.44□□□□□ -1.54
HTTP42858 AC015795.1-201ENST00000513669 327 ntBASIC5.44□□□□□ -1.54
HTTP42858 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.44□□□□□ -1.54
HTTP42858 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC5.44□□□□□ -1.54
HTTP42858 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.44□□□□□ -1.54
HTTP42858 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC5.44□□□□□ -1.54
HTTP42858 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 RPL23AP59-201ENST00000399415 461 ntBASIC5.44□□□□□ -1.54
HTTP42858 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HTTP42858 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms