Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HNF4AP41235 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HNF4AP41235 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.46□□□□□ -1.54
HNF4AP41235 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 GVINP1-202ENST00000531871 7271 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
HNF4AP41235 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 MTCO1P8-201ENST00000416914 1523 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HNF4AP41235 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 MIR375-201ENST00000362103 64 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 SNORA64.1-201ENST00000362600 132 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HNF4AP41235 RNA5SP296-201ENST00000410523 111 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 BX119321.1-201ENST00000428912 797 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC073109.1-201ENST00000445066 978 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 RPS23P6-201ENST00000466136 431 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 PSAT1P4-201ENST00000466500 526 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 RN7SL197P-201ENST00000466981 299 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 AC109481.1-201ENST00000509173 282 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 OR4A43P-201ENST00000532938 908 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC079600.1-201ENST00000550326 297 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC008521.2-201ENST00000591021 259 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC027243.2-201ENST00000602530 724 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 AL390318.1-201ENST00000624564 687 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HNF4AP41235 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.45□□□□□ -1.54
HNF4AP41235 AC068870.1-201ENST00000563737 2455 ntBASIC5.45□□□□□ -1.54
HNF4AP41235 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 AC092681.1-201ENST00000297369 291 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 RNA5SP326-201ENST00000363209 110 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 RNA5SP394-201ENST00000364216 119 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HNF4AP41235 EEF1B2P8-201ENST00000414101 671 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AL590806.1-201ENST00000415818 853 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 RPL5P25-201ENST00000441148 775 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 RN7SL809P-201ENST00000482040 297 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.44□□□□□ -1.54
HNF4AP41235 RN7SKP253-201ENST00000516424 309 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AC067904.2-201ENST00000517322 1283 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC122688.1-201ENST00000541494 223 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
HNF4AP41235 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms