Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGCLP35914 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGCLP35914 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 RNU1-146P-201ENST00000364015 165 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 RN7SKP153-201ENST00000365026 316 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 SNORA67-201ENST00000384423 137 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 RNU1-149P-201ENST00000390870 161 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCLP35914 HSPD1P12-201ENST00000429127 1069 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 OR2AO1P-201ENST00000476497 403 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 RPL7P39-201ENST00000481157 744 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGCLP35914 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGCLP35914 AL049779.2-201ENST00000553847 315 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 AL359219.2-201ENST00000555184 348 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 NMNAT1P5-201ENST00000559657 841 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCLP35914 AC022467.1-201ENST00000614738 749 ntBASIC5.31□□□□□ -1.56
HMGCLP35914 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCLP35914 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCLP35914 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
HMGCLP35914 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCLP35914 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HMGCLP35914 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGCLP35914 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 OR9G4-201ENST00000302957 984 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGCLP35914 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGCLP35914 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGCLP35914 SLC35E1P1-201ENST00000419313 864 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 RPL19P16-201ENST00000433839 588 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCLP35914 AL136455.1-201ENST00000441083 1240 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AC104634.1-201ENST00000452720 462 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 RPS21P4-201ENST00000487122 248 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AC024558.1-201ENST00000505008 528 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 PGAM1P13-201ENST00000507497 754 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCLP35914 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCLP35914 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCLP35914 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCLP35914 MIR4660-201ENST00000583549 74 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCLP35914 AC009597.2-201ENST00000604659 592 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AL162431.4-201ENST00000604674 411 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCLP35914 AP000864.1-201ENST00000609424 650 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 AL122125.1-201ENST00000616999 600 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 MTCO1P1-201ENST00000624263 1081 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCLP35914 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HMGCLP35914 AC002525.1-201ENST00000624392 1622 ntBASIC5.3□□□□□ -1.56
HMGCLP35914 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCLP35914 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCLP35914 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCLP35914 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCLP35914 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms