Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC090220.1-201ENST00000593078 1699 ntBASIC9.02□□□□□ -0.97
CUX2O14529 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CUX2O14529 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CUX2O14529 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CUX2O14529 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CUX2O14529 AC092747.4-201ENST00000620519 1861 ntBASIC9.02□□□□□ -0.97
CUX2O14529 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CUX2O14529 IGKV7-3-201ENST00000357453 298 ntBASIC9.02□□□□□ -0.97
CUX2O14529 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CUX2O14529 MIR105-1-201ENST00000385222 81 ntBASIC9.02□□□□□ -0.97
CUX2O14529 CEACAMP8-201ENST00000413902 580 ntBASIC9.02□□□□□ -0.97
CUX2O14529 RPS26P38-201ENST00000414476 348 ntBASIC9.02□□□□□ -0.97
CUX2O14529 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.02□□□□□ -0.97
CUX2O14529 AC093414.1-201ENST00000434712 514 ntBASIC9.02□□□□□ -0.97
CUX2O14529 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC9.02□□□□□ -0.97
CUX2O14529 AL136455.1-201ENST00000441083 1240 ntBASIC9.02□□□□□ -0.97
CUX2O14529 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC9.02□□□□□ -0.97
CUX2O14529 AP000769.2-201ENST00000602344 396 ntBASIC9.02□□□□□ -0.97
CUX2O14529 NRK-204ENST00000540278 1687 ntTSL 2 BASIC9.01□□□□□ -0.97
CUX2O14529 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC9.01□□□□□ -0.97
CUX2O14529 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC9.01□□□□□ -0.97
CUX2O14529 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC9.01□□□□□ -0.97
CUX2O14529 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.01□□□□□ -0.97
CUX2O14529 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
CUX2O14529 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 MIR298-201ENST00000401212 88 ntBASIC9.01□□□□□ -0.97
CUX2O14529 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC9.01□□□□□ -0.97
CUX2O14529 RPS4XP16-201ENST00000427198 791 ntBASIC9.01□□□□□ -0.97
CUX2O14529 CRIP1P1-201ENST00000427567 185 ntBASIC9.01□□□□□ -0.97
CUX2O14529 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC9.01□□□□□ -0.97
CUX2O14529 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC9.01□□□□□ -0.97
CUX2O14529 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC9.01□□□□□ -0.97
CUX2O14529 RSU1P1-201ENST00000453416 441 ntBASIC9.01□□□□□ -0.97
CUX2O14529 RPL12P39-201ENST00000455456 496 ntBASIC9.01□□□□□ -0.97
CUX2O14529 RPL12P20-201ENST00000475538 479 ntBASIC9.01□□□□□ -0.97
CUX2O14529 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.01□□□□□ -0.97
CUX2O14529 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC9.01□□□□□ -0.97
CUX2O14529 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC9.01□□□□□ -0.97
CUX2O14529 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.01□□□□□ -0.97
CUX2O14529 AC112200.1-201ENST00000625015 234 ntBASIC9.01□□□□□ -0.97
CUX2O14529 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CUX2O14529 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CUX2O14529 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC9□□□□□ -0.97
CUX2O14529 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CUX2O14529 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
CUX2O14529 AL451142.1-201ENST00000375867 775 ntBASIC9□□□□□ -0.97
CUX2O14529 SNORA70.9-201ENST00000384370 135 ntBASIC9□□□□□ -0.97
CUX2O14529 AC096921.1-201ENST00000411661 375 ntBASIC9□□□□□ -0.97
CUX2O14529 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC9□□□□□ -0.97
CUX2O14529 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC9□□□□□ -0.97
CUX2O14529 MTCO1P35-201ENST00000515270 228 ntBASIC9□□□□□ -0.97
CUX2O14529 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9□□□□□ -0.97
CUX2O14529 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC9□□□□□ -0.97
CUX2O14529 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC9□□□□□ -0.97
CUX2O14529 MIR3158-1-201ENST00000583596 81 ntBASIC9□□□□□ -0.97
CUX2O14529 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC9□□□□□ -0.97
CUX2O14529 MSL3P1-202ENST00000440028 1468 ntBASIC9□□□□□ -0.97
CUX2O14529 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CUX2O14529 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
CUX2O14529 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.99□□□□□ -0.97
CUX2O14529 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 RNA5SP191-201ENST00000362585 102 ntBASIC8.99□□□□□ -0.97
CUX2O14529 MIR670-201ENST00000390142 98 ntBASIC8.99□□□□□ -0.97
CUX2O14529 DBIP1-201ENST00000401435 260 ntBASIC8.99□□□□□ -0.97
CUX2O14529 RNU4-64P-201ENST00000410795 131 ntBASIC8.99□□□□□ -0.97
CUX2O14529 AC091390.3-201ENST00000426478 338 ntBASIC8.99□□□□□ -0.97
CUX2O14529 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.99□□□□□ -0.97
CUX2O14529 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 RPS17P5-201ENST00000498293 408 ntBASIC8.99□□□□□ -0.97
CUX2O14529 OR8G5-201ENST00000524943 1041 ntBASIC8.99□□□□□ -0.97
CUX2O14529 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.99□□□□□ -0.97
CUX2O14529 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.99□□□□□ -0.97
CUX2O14529 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.99□□□□□ -0.97
CUX2O14529 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CUX2O14529 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CUX2O14529 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CUX2O14529 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.98□□□□□ -0.97
CUX2O14529 AL121886.1-201ENST00000358609 435 ntBASIC8.98□□□□□ -0.97
CUX2O14529 SNORD1C-201ENST00000363315 78 ntBASIC8.98□□□□□ -0.97
CUX2O14529 AL672167.2-201ENST00000377164 879 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms