Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 DDX18P6-201ENST00000450119 1997 ntBASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 LINC02019-201ENST00000608605 2060 ntBASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 AC132825.1-201ENST00000463573 2247 ntBASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 AL359715.4-201ENST00000606629 1436 ntBASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.74□□□□□ -1.49
TBC1D3FA6NER0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RN7SKP162-201ENST00000363605 345 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 TAF9BP2-201ENST00000400856 499 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 MIR1178-201ENST00000408396 91 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 NPM1P4-201ENST00000414095 812 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AL158050.1-201ENST00000416077 457 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 NENFP1-201ENST00000419476 466 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 MTCYBP7-201ENST00000419540 1134 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AL606495.1-201ENST00000422100 813 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 BX510359.3-201ENST00000422168 306 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC012075.1-201ENST00000436549 580 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AL645931.1-201ENST00000439737 410 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AL133445.1-201ENST00000467051 452 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 SLC25A51P1-201ENST00000468432 871 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RN7SL184P-201ENST00000488308 297 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC121161.1-201ENST00000510606 652 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 RN7SKP67-201ENST00000515905 235 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC025918.2-201ENST00000558683 763 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC083837.1-201ENST00000565297 2994 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC096947.1-201ENST00000603233 470 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 MTCO2P22-201ENST00000603246 681 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC013244.1-201ENST00000604279 193 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 AC010608.3-201ENST00000625048 527 ntBASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TBC1D3FA6NER0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AC018809.2-201ENST00000602436 3823 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 RNU6-1000P-201ENST00000391066 106 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 SNORA11B-201ENST00000408175 129 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 RN7SKP59-201ENST00000410520 314 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL158827.1-201ENST00000416300 391 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL355433.1-201ENST00000422804 300 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 BX119904.1-201ENST00000432026 348 ntBASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TBC1D3FA6NER0 AL390119.1-201ENST00000440329 312 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms