Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC021193.1-201ENST00000511607 420 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC110760.3-202ENST00000515177 371 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 SNORA70.20-201ENST00000516848 126 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 SCARNA20.4-201ENST00000516969 131 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC092709.1-201ENST00000521355 1045 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 OR4A43P-201ENST00000532938 908 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 UBTFL9-201ENST00000534504 1148 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC093014.1-201ENST00000548926 724 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 NOP56P3-201ENST00000549457 385 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC005726.4-201ENST00000582858 458 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 MTCO3P22-201ENST00000603219 784 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC005021.1-201ENST00000608730 355 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RMST_5.1-201ENST00000618704 126 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AL390318.1-201ENST00000624564 687 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AL445984.1-201ENST00000637834 659 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC087565.3-203ENST00000641018 837 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 AC073869.8-201ENST00000641806 335 ntBASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV7S3A2A0A539 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL353796.1-201ENST00000561542 3241 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SNORD56.6-201ENST00000384569 71 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SNORD65-201ENST00000391079 73 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC069282.1-201ENST00000411911 526 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 GLUD1P9-201ENST00000420997 1173 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 NPM1P29-201ENST00000483112 803 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 RN7SL170P-201ENST00000487098 295 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 RPS26P24-201ENST00000497656 331 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 RNU6-334P-201ENST00000517072 102 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 BCAS2P1-201ENST00000528022 632 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AP004609.2-201ENST00000532177 190 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 H3F3BP2-201ENST00000583907 357 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC129778.1-202ENST00000623812 261 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AC129915.3-201ENST00000634128 948 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AL591379.1-207ENST00000635982 261 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TCRBV7S3A2A0A539 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC090220.1-201ENST00000593078 1699 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms