Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MTND5P4-201ENST00000514978 288 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 RNU6-1281P-201ENST00000516223 105 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC008429.4-201ENST00000521201 182 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC093027.1-201ENST00000546698 429 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF322P1-201ENST00000568013 1209 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 MIR3682-201ENST00000581338 84 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 MIR548Y-201ENST00000582739 110 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC005518.2-201ENST00000603254 282 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AL391903.2-201ENST00000614532 247 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AC006504.8-201ENST00000621046 635 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 AL132796.3-201ENST00000624703 900 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 CCT4P2-201ENST00000233836 1548 ntBASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PCDHB11Q9Y5F2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 DBF4P1-201ENST00000412976 1892 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 OR2A3P-202ENST00000641249 1776 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RNU6-582P-201ENST00000362989 107 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 GAS8-AS1-201ENST00000408886 435 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 USP9YP36-201ENST00000424581 829 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 VDAC2P3-201ENST00000430995 828 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RPL35P8-201ENST00000433284 337 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 OR52E7P-201ENST00000452394 933 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 MRPS21P1-201ENST00000453850 223 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 TDGF1P6-201ENST00000463873 448 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RPL34P34-201ENST00000465389 354 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 OR7E99P-201ENST00000505750 922 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 SCARNA20.1-201ENST00000516009 138 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AP003122.4-201ENST00000530980 758 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC068587.4-201ENST00000533893 186 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AP003034.1-201ENST00000534621 422 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 POLR2KP1-201ENST00000553226 168 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC023310.2-201ENST00000553844 547 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 RPL21P5-201ENST00000554662 472 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AL157394.1-201ENST00000562983 1224 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC012182.1-201ENST00000570133 895 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AC024085.1-201ENST00000604299 432 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AL451085.1-201ENST00000604546 690 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 AL132765.2-201ENST00000610812 351 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PISRT1-201ENST00000626175 531 ntBASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
PCDHB11Q9Y5F2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms