Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 Y_RNA.117-201ENST00000363294 101 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SET-203ENST00000372688 801 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 Y_RNA.552-201ENST00000384665 112 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 Y_RNA.556-201ENST00000384677 113 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 RNY4P36-201ENST00000391116 96 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC092642.1-201ENST00000392417 425 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 HMGB3P2-201ENST00000411913 584 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL022100.1-202ENST00000421214 548 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC007562.1-201ENST00000421819 517 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 VDAC2P3-201ENST00000430995 828 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL513175.1-201ENST00000431492 780 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL137792.2-201ENST00000443484 235 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 RAB28P3-201ENST00000448325 597 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC132479.1-201ENST00000449160 144 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 RN7SL791P-201ENST00000467868 295 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC084878.1-201ENST00000480555 648 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 CEACAMP3-202ENST00000483806 638 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 RNU6-835P-201ENST00000516974 104 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TPM3P3-201ENST00000521343 354 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 PCNAP4-201ENST00000532690 730 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AL163153.1-201ENST00000554223 283 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC034105.3-201ENST00000565294 442 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 MIR4666A-201ENST00000580160 79 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC011816.2-201ENST00000607089 556 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC010886.1-201ENST00000437380 2869 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC105046.1-201ENST00000566457 4997 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC090337.1-201ENST00000579651 2074 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 DDX10P2-201ENST00000417796 2614 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 UGT2B24P-201ENST00000514441 1597 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 FTOP1-201ENST00000419363 861 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RPSAP1-201ENST00000421328 880 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL669831.1-202ENST00000428504 417 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC105052.2-201ENST00000434317 794 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL049734.2-201ENST00000441066 616 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL512605.1-202ENST00000441919 381 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RPL32P28-201ENST00000443577 397 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RN7SL145P-201ENST00000469955 296 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC083798.1-201ENST00000472671 131 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RN7SL152P-201ENST00000484176 298 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RNU6-764P-201ENST00000516396 105 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC009902.1-201ENST00000519351 183 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 EIF4EBP2P2-201ENST00000563883 333 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC091304.5-201ENST00000568969 158 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms